Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2293 ATGTTAACTTCTCTCTGGGAATCAATTTTGGGTCCGAGAGGTACAGATTCTTTCAGTTCTTGTAATGATTCTCATAACATCCAAAGCTATAAATACGATGTGTTTATCAGTTTTAGAGGTTCCGACACGCGCAACACCTTTGTTGATGATCTCTACGCTCATCTTGTTAGAAAAGGTTTTTTTGTATTCAAAGATGACAAACAAATTCAGAAAGGAGAATCTATTTCACCTCAACTTTTGCAAGCAATTATGCTTCCTCAACTTGGTGATGAAATGGCTGCTATTGCTGATTGCCTCGCTGAATTAAAACAAATTGTTTTTCCTGTTTTCTATAATGTTGATCCATCTCATGTGAGGAAACAAAATGGAGTGTACCAATTTTCCTTTGTTTTTCACGCACTCAAACATGATCACAAGAGCAAGGTTGATCGATGGAAGAGTGCTATGACTTGTTTAGCTGCATTAGCTGGTTGGGATATCAGGAGCAAGCCAGAGTTTGAAGAGATTGAAAAACTTGTTCAAGCTGTAACAAAAACATTGTGTCATAAATTCTCAGGGTTTCCTGATGACCTTATTGGAATGCAACCTCGCATAGAAGCATTAGAAAGAAAAGACTTAGGAAAGACATCTCTTGCAACTGTCTTGTATGACAAAATCTCATATCAGTTTGACGCAAGTTGTTTTATTGAAAACATTAGCAAAGTTTATGAAGATGGTGGTGCTATCGCCGTGCAGAAACAAATTCTTCATCAAACTATAAAAGAAACTTTTTTAGAGGCATACAGTCCTTCTGAAGTATCCGGACTTTTAACAAATATGCTACAAAACATGATGGTTCTTCTTGTTCTTGACAATGTCGATCAATTCGAACAACTACAACCATTATATATAACCCCCAAATTTCTTGGCGCGGGTAGTAGAATAATCATAACCACTCAAGATGAGCATATTCTAAAACTGTATCGAAATGACGCTCATAAATTTTTATGCAGAAAAGCCTTCAAAGATGATTATTCTTGGAGTAATCATACAGAGTTGATACCTGAGGTACTAAAATATGCTCAACGTCTTCCATTAACCGTTAGAATAATGGGTTCTTTCTTGTATGCCCGAAATGCCAGACAGTGGAGAGCTACATTGGATGGATGGCTGAATCATCCAAATAGTAGAATCATGAAAGTGCTCCTGACTAGTTTTGAGGGACTAGAGGAAAGAGAGAGAGAAATATTTCTTCATGTTGCTTGTTTCTTTAAAGGAGAAAGCGTGGATTATGTGAGGCGAATTCTAGACGCTTGTGGATTGAACCCTGATATTGGAATTCCAATTATCACTGAAAAATCACCCATAACCATTAGAAACCAGGAAATTCATATGCATGATACATTGCAAAATGAAATACAAGTTAAAGCTATAGTCCTAGATCAAAAGGAGGATGGGTTCAAATTCAAGAAGTTGAGGGCTGAAGATTTATCAAAAATGAGGCACCTTAAATTGCTCATAATAGATCATAAGAATTTTTCAGGAACGCCGGTGTCCCTCTCAAACTCGCTTCGCTATCTTTCATGGAATGGTTGCCCTTTCATTTCTTTGCCCTCAAATTTTCAACCATGCAACCTTGTTGAATTGAATATGCCTTACAGTAGCATCGAACAATTATGGGAAGGCATTCAGGTACTTTTAATGCTCCTTTCATTTTGTTCTCTCAATTCAAATCAACGGTAG 1722 0.3699 MLTSLWESILGPRGTDSFSSCNDSHNIQSYKYDVFISFRGSDTRNTFVDDLYAHLVRKGFFVFKDDKQIQKGESISPQLLQAIMLPQLGDEMAAIADCLAELKQIVFPVFYNVDPSHVRKQNGVYQFSFVFHALKHDHKSKVDRWKSAMTCLAALAGWDIRSKPEFEEIEKLVQAVTKTLCHKFSGFPDDLIGMQPRIEALERKDLGKTSLATVLYDKISYQFDASCFIENISKVYEDGGAIAVQKQILHQTIKETFLEAYSPSEVSGLLTNMLQNMMVLLVLDNVDQFEQLQPLYITPKFLGAGSRIIITTQDEHILKLYRNDAHKFLCRKAFKDDYSWSNHTELIPEVLKYAQRLPLTVRIMGSFLYARNARQWRATLDGWLNHPNSRIMKVLLTSFEGLEEREREIFLHVACFFKGESVDYVRRILDACGLNPDIGIPIITEKSPITIRNQEIHMHDTLQNEIQVKAIVLDQKEDGFKFKKLRAEDLSKMRHLKLLIIDHKNFSGTPVSLSNSLRYLSWNGCPFISLPSNFQPCNLVELNMPYSSIEQLWEGIQVLLMLLSFCSLNSNQR* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2293 573 Gene3D - 205 323 IPR027417 -
Mal3g2293 573 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 95 478 - -
Mal3g2293 573 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 206 412 IPR027417 -
Mal3g2293 573 ProSiteProfiles TIR domain profile. 30 180 IPR000157 GO:0007165
Mal3g2293 573 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 158 IPR035897 -
Mal3g2293 573 Pfam Leucine Rich Repeat 538 557 IPR011713 -
Mal3g2293 573 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 95 478 IPR044974 GO:0006952
Mal3g2293 573 PRINTS Disease resistance protein signature 480 496 - -
Mal3g2293 573 PRINTS Disease resistance protein signature 273 287 - -
Mal3g2293 573 PRINTS Disease resistance protein signature 354 368 - -
Mal3g2293 573 PRINTS Disease resistance protein signature 197 212 - -
Mal3g2293 573 SUPERFAMILY L domain-like 486 571 - -
Mal3g2293 573 Gene3D - 324 403 IPR042197 -
Mal3g2293 573 Gene3D Ribonuclease Inhibitor 450 572 IPR032675 -
Mal3g2293 573 Gene3D - 25 85 IPR035897 -
Mal3g2293 573 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 26 83 - -
Mal3g2293 573 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 487 561 - -
Mal3g2293 573 SMART till_3 31 155 IPR000157 GO:0007165
Mal3g2293 573 Pfam NB-ARC domain 206 376 IPR002182 GO:0043531
Mal3g2293 573 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 83 IPR044974 GO:0006952
Mal3g2293 573 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 487 561 IPR044974 GO:0006952
Mal3g2293 573 SUPERFAMILY "Winged helix" DNA-binding domain 390 464 IPR036390 -
Mal3g2293 573 Pfam TIR domain 31 83 IPR000157 GO:0007165
Mal3g2293 573 Pfam TIR domain 90 179 IPR000157 GO:0007165
Mal3g2293 573 Gene3D - 86 187 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2293 Mal-Chr3 92243484 92254284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2293 206 572 WRKY Transcription Factor Family AT5G45050 28.966 2.19e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2293 - - lja:Lj1g3v2482340.1 634.024