Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2287 ATGGGTACTAAGACTAGTTACGGTCTTTTTACTTCAATATCTTGGCTCTTGCAACCGTTACTTGCTCTGTGTGACTGTCTTCCTTTTTCCGATCCGAGCATCTTGGATCAAGATGGTACAAGTACAACGGCTAGTTCTTCGAATAGCATCCAAAGCTATAGATACGATGTGTTTATCAGTTTTAGAGGTGTTGATACACGTAACACCTTTGTTGATCATCTCTACGCTCATCTTGTTAGAAAAAGTATTTTTGTTTTCAAAGATGACAAGCAGCTTCAGAAAGGTGAATCCATTTCACCCCAGCTTCTACATGCAATTCAACATTCACGGGTTTCTATTATTGTTTTCTCGAAAGATTATGCTTCCTCAACTTGGTGTTTGGATGAAATGGCGGCTATTGATGAATCTAGAAGAAATTTGAAACATGTTGTATTCCCTGTTTTTTATGATGTCGATCCATCTCATGTCCGAAAACAGAATGGAGTATATGAGAATGCCTTTGTTTTACACACTCAGCAATTCACACATGATCCTCACAAGGTTGATGGGTGGAAGAGAGCTATGACCTGTTTGGCAGGATTATCTGGCTGGGATGTCTGGCATATGCGAGAATTTGAAGTGATTGAAAATATTGTCCAGGCAGTAATCGAAAAGTTGGGTCATAAGTTCTCAGAGTTTGCTGAAGACCTTATCGGAATACAACCTCGAGTACAGGAATTAGAAAACCTTTTAGCACTAATCTCAGAGAACGATCGTTGCCTAGTTTTAGGAATATGGGGGATGGATGGCATAGGAAAGACAACTATTGCCAGTGTCTTGTATGACACAATCCACTATCAATTTGATGCTTGTTGTTTCATTGGGAAAGTCAACAAAATTTATAGAGATGGTGGTGCTATTGCTATACAGAAACAAATCCTCCATCAAAATCTGGATGCATACAACCCTTCTGAAATATCTGGAATTATAACAAATAGGCTATACAACATGAAGCTCCTTCTAGTTCTAGATGACGTTGATCAATTTGAGCAGCTAAAGGAATTGCACATAAAGCCCAAATCACTTTGTGCAGGAAGTAGAATAATCATAACCACTAGGGATATGCATATCCTTAAATTGTATGGAGCAAATAGAATTCACAAGATTGAATTGATGAATGATAATGATGCTTATCAACTTCTCTACAGAAAAGCCTTCAAAAGTGATGATTCATGCAGTGATTGCGAAGAACTTATTCCTGAGGTACTAAAATACAGTCAAGGTCTTCCATTAGCAATTATAGTAATGGGCTCTTTCTTGTATAAAAGAAATATCACCCAATGGAGAGCTACCTTGGAAGGATGGGAAAATAACCCGGATAATGGAATTATGAAAGTGCTACAGTCAAGTTTTGAGGGACTACAACCAAGAGAGAGAGAAATATTTTTGTATGTTGGTTGCTTCTTTGAAGGGGAGAGGGAGGATTATGTAAGGCGAATTCTAGATGCTTGTGGATTGCAGCCTGCTATTGGAATTCCACTTATCGCTGAAAAATCGTTCATAACGATTAGAAACGAGGAAATTCATATGCATAAAATGTTGCAAGAGTTGGGGAAGCAAATTCATGCCATGATTACAAAATCGGAAGCAGTAAAAGCTAAAGCCATAATTCTAAATCAAAAGGAGGATATCAGCAAATTTAATCAGTTGAGGGCTGAAGATTTATCAAAAATGGAAAACTTGGAAGTGCTCATATTATATCATTCAAATTTTTCAGGGAGCCCCATATTTCTTTCTAATTCCCTACGCTTTGTTTTGTGGAATGATTACCCTTTCATGTCTTTACCATCAAATTTTCATCCATATCATCTTGTAGAATTAAATATGCCTGATAGCAGCATTGAACAGCTATGGATAGGCATCCAGGTATTTACCTTATTGCAATTTTCATCTTTTCCACTCTGCATAAATAGTTGA 1956 0.3737 MGTKTSYGLFTSISWLLQPLLALCDCLPFSDPSILDQDGTSTTASSSNSIQSYRYDVFISFRGVDTRNTFVDHLYAHLVRKSIFVFKDDKQLQKGESISPQLLHAIQHSRVSIIVFSKDYASSTWCLDEMAAIDESRRNLKHVVFPVFYDVDPSHVRKQNGVYENAFVLHTQQFTHDPHKVDGWKRAMTCLAGLSGWDVWHMREFEVIENIVQAVIEKLGHKFSEFAEDLIGIQPRVQELENLLALISENDRCLVLGIWGMDGIGKTTIASVLYDTIHYQFDACCFIGKVNKIYRDGGAIAIQKQILHQNLDAYNPSEISGIITNRLYNMKLLLVLDDVDQFEQLKELHIKPKSLCAGSRIIITTRDMHILKLYGANRIHKIELMNDNDAYQLLYRKAFKSDDSCSDCEELIPEVLKYSQGLPLAIIVMGSFLYKRNITQWRATLEGWENNPDNGIMKVLQSSFEGLQPREREIFLYVGCFFEGEREDYVRRILDACGLQPAIGIPLIAEKSFITIRNEEIHMHKMLQELGKQIHAMITKSEAVKAKAIILNQKEDISKFNQLRAEDLSKMENLEVLILYHSNFSGSPIFLSNSLRFVLWNDYPFMSLPSNFHPYHLVELNMPDSSIEQLWIGIQVFTLLQFSSFPLCINS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2287 651 Gene3D - 224 378 IPR027417 -
Mal3g2287 651 PRINTS Disease resistance protein signature 255 270 - -
Mal3g2287 651 PRINTS Disease resistance protein signature 558 574 - -
Mal3g2287 651 PRINTS Disease resistance protein signature 326 340 - -
Mal3g2287 651 PRINTS Disease resistance protein signature 419 433 - -
Mal3g2287 651 Gene3D - 51 223 IPR035897 -
Mal3g2287 651 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 197 IPR035897 -
Mal3g2287 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 477 IPR027417 -
Mal3g2287 651 SUPERFAMILY L domain-like 562 641 - -
Mal3g2287 651 Pfam Leucine Rich Repeat 616 635 IPR011713 -
Mal3g2287 651 SMART till_3 54 194 IPR000157 GO:0007165
Mal3g2287 651 Gene3D - 385 468 IPR042197 -
Mal3g2287 651 Pfam TIR domain 55 225 IPR000157 GO:0007165
Mal3g2287 651 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 48 640 IPR044974 GO:0006952
Mal3g2287 651 ProSiteProfiles TIR domain profile. 53 219 IPR000157 GO:0007165
Mal3g2287 651 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 48 640 - -
Mal3g2287 651 Pfam NB-ARC domain 245 451 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2287 Mal-Chr3 92107086 92124809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2287 231 641 WRKY Transcription Factor Family AT5G45050 31.087 1.84e-59 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2287 - - mtr:MTR_7g069120 765.377