Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2286 ATGGACTCATCAAACTCAACGTCAAACCAATCTGATCGTTTAACTTCGAGAACTTGGCTCTTCCGATCGTTACATGCCTTGTGTTGCCGTCAGTCATTAACCGATTTGAACATCTTGGATGAAGAAGTTACAACTTCAACTGATTTGAACATCTTGTCTACAACTGGTAGTTCTTCGAATGATTTTGATAGCATTCAAAGCTATAGATATAGATATGATGTGTTTATCAGTTTCAGAGGTGTTGACACCCGGAACACCTTTGTTGACCATCTCTATGCTCATCTCACTAGAAAAGGTATTTTCACATTCAAGGATGACACACAGCTCCAGCAAGGAGAATCTATTTCACCCCAACTTCGACAAGCAATTCAACACTCGCGAGTTTCTATAGTTGTCTTTTCAGAAGAATATGCTGACTCAACTTGGTGTTTGAGTGAAATGTCTTTTATTGCTGAATGCCTTGCACAACTAAAACAAATTGTTTTACCTGTTTTCTATCATGTCGATCCATCTCAAGTCCGAAAACAAAATGGAGAGTATGAGCAGGCCTTTGTTTTCCACACTGAGACATTCAAACATGATGGTCCACACATGGTTGATAGGTGGAAGAGAGCTATGACCTGTTTGGCTGGATTAGCTGGTTGGGATGTTCGGAATACGTCAGAATCTAAAGTGATTGAAAGTATTGTCCAGGCTGTAACAGAAAAATTGGGTCATAAATTCTCAGGTTCTGCTGATGACCTTTTCGGAATACAACCTCGAGTACAAGCGTTAGAAAATCTTTTAAAACTAAGTTCAGATGATGATGGTTGTCGAGTTTTAGGAATATGGGGGATGGATGGCATAGGAAAGACAACTCTTGCCAATGTCTTGTATGACACAATCTCACATCACTATCAATTTGATGCTTGTTGTTTCATTGAGGATGTGAGTAAAATTTATAGAGATGGTGGTGCTATTGCTGTGCAGAAACGAATTCTCCATCAAACTATAAAAGAAAATATTATGGAAGGATACAGTCCTTCTGAGATATCTGGAATTATTACAAACAGGCTATACAAGTTGAAGCTCCTACTAGTTCTTGACAATGTTGATCAATCTTTGCAACTACAAGAATTGCACATAAATCCTATAGCTCTTTGTGCAGGAAGTAGAATAATCATAACCACTAGGGATGAGCATATTCTCAAAGAATATGGAGCTGATATAGTTTATGAGGCTGAATTGATGAATGATAATGATGCTCATGAACTTCTCTGTAGAAAAGCCTTCAGAAGTGATTATTCAAGCAGTGATTATGCAGAGCTGATTCCGGAGGTACTAAAGTATGCTCAAGGTCTTCCATTAGCAATTAGAGTAATGGGGTCTTTCTTGTACTATAGAAATACCACCCAATGGAAAGCTACCTTGGAAGGATTGGTGAATAATCCAGATAGTGGAATTATGAAAGTGCTTCGGTCAAGTTTCGAGGGACTAGAGCTAAGAGAGAGAGAAATATTTTTGCATGTTGCTTGCTTCTTTGATGGGGAGAGGGAAGATTATGTAAGGAGAATTCTACATGCTTTTGGATTGCAGCCTAATATTGGAATTCCACTTCTTGCTGAAAAATCACTAATAACTATTAGAAACCAAGAAATTCATATGCATGAAATGTTGCAAGAGTTGGGGAAGCAAATTGTTCGGGAACAACATCCTGATGAGCCAAGATTATGGACTAGATTATGGCTTTACAGTGACTTCTATCATGCAATGATTACAAAATCGGAAGCAATGAAAGCTAAAGCCATAGTTCTAAATCAAAAGGAGGATGTCAGCAAATTCAATCAGTTGAGGGATGAAGATTTTTCAAAAATTGAAAATTTGAAAGTGCTCATATTATATCATACAGAATTTTCAGGAAGCCCTATACTTCTTTCTAATTCCCTATACTATATTTTGTGGAATGGTTACCCTTTCACGTCTTTGCCATCAAATTTTAATCCATATCAGCTCGTAGAATTGAATATGCCTGATAGCAGCATTGAACAACTATGGACAGGCATCCAGCATCTCCCCTGTTTGAAAAGGATTGATCTTAGCAACTCTAAAAATCTGAAGACGACTCCATGTTTTGAGAAAATCCTAAACCTCGAGCGGCTAGATCTTACAGGATGCATAAACTTATTGCATGTTCATCCATCAATTGGACTTCTTACAGAACTCGTATTCTTGAGTTTGCAGAACTGTAGTAGTCTAGGTAGCCTTGATTTTGGAAATGCAGCAGAATTATGGTCTCTAAAAGTTTTGCGTCTCTCTGATTGCTCAAAACTGGAAAACACTCCGGATTTTAGTGGAGTGAGTTTTCTACAGTATCTTGATATGGACCGATGTGCAAGTTTATCAACAATTCATGAATCTATTGGAGCTCTTGCAACTCTTAGATTCCTAAGTTTGAGAGACTGCACAAATCTTGTTGGGATACCTGAGAGTTTTAATAAGATGGCATCACTTACAACTCTAGATCTACGCGGATGCTCCAAATTTACAGAGCTAGGATGTACTTCTACTTCTCATCTGCATCTGCAATCTTTGATTTATCTAGACTTAAGCTTTTGCAGTATTTCCATAATGCCTGATGCTATTGGAGAATTAATTTGTTTAGAAAGACTAAATCTTCAGGGAAACAATTTTACTTCACTTCCTTCTACATTGAATTGGCTTCACAATCTATCATATTTAAACTTGTCTCATTGCCATAAGCTTCAGAGTTTGCCTTTGTTACCAACAGAAAGTGGTCCATCAGATTCAGTGGGAAGATATTTTAAAACAACATCTGGATCCCGTGATCATAGATCAGGATTCTATATTTTTGACTCTCCCAAATGCATGAAGTTTGTATCCCGTAATCATGAATGTTTATATTGGTTCCCCTTTGGATGGGTACTAAGACTAATTAAGGAACCTCTTCACTTTCGGTTTGGCTTTGACGTTGTTCTTCCTTGGCATGGGGAAACTAATGGTTCTCGTGGACATCGTGCTATTCCAAAGACCCTCACCCGTTCCTGGTCTGACAAGGTTTCAGAGTTGTTCCATCACCAGTTTAAAGGGGGTTCGATAGTAAGGATAAATAACTCTGTTGTGAATGATGGCTGGGTTGGCTTTCTCTTTTTTGTAACATTTGAGTTAAACAATCATCATGTACCGTCTAGTTCTCCACATCAATCACACTCTTTGCCACCACTGCCACATCCGTTTTATCTTTCTTTTGAGAGCGAATACACGGAAGAACGCTTTGATATGCAACTAGATTTGGAACGGAATACGGTTGATGGCAAAAACTATCTTTGGACAATCTATATCTCCCGGGAACACTGTCATTTTGTAGAAACAGGAGCACAAATCACATTTAAAGCCCGCCAAGGTTTGATTATCAAGGAATGGGGGTTGCGTGTCGTAACCAAGAAAGACACAGAGGGCTCAAAAATGGGAAGGAGTGTACATCTTCCTTTACAGATCATTGATAATGCAGAAGAAAGCAGCAACAATGGCAGCTTTGAGCCTAAAATCCAACTTCCTTACAATTGGTTAGTTTCTGATGAAGATAAAACCGAGACAGATGAAGCCAAGGGGAAAGAAACAGATCTCTTTAATCTTGGCCTTTTTACGGAAAGACCACAATGA 3660 0.3844 MDSSNSTSNQSDRLTSRTWLFRSLHALCCRQSLTDLNILDEEVTTSTDLNILSTTGSSSNDFDSIQSYRYRYDVFISFRGVDTRNTFVDHLYAHLTRKGIFTFKDDTQLQQGESISPQLRQAIQHSRVSIVVFSEEYADSTWCLSEMSFIAECLAQLKQIVLPVFYHVDPSQVRKQNGEYEQAFVFHTETFKHDGPHMVDRWKRAMTCLAGLAGWDVRNTSESKVIESIVQAVTEKLGHKFSGSADDLFGIQPRVQALENLLKLSSDDDGCRVLGIWGMDGIGKTTLANVLYDTISHHYQFDACCFIEDVSKIYRDGGAIAVQKRILHQTIKENIMEGYSPSEISGIITNRLYKLKLLLVLDNVDQSLQLQELHINPIALCAGSRIIITTRDEHILKEYGADIVYEAELMNDNDAHELLCRKAFRSDYSSSDYAELIPEVLKYAQGLPLAIRVMGSFLYYRNTTQWKATLEGLVNNPDSGIMKVLRSSFEGLELREREIFLHVACFFDGEREDYVRRILHAFGLQPNIGIPLLAEKSLITIRNQEIHMHEMLQELGKQIVREQHPDEPRLWTRLWLYSDFYHAMITKSEAMKAKAIVLNQKEDVSKFNQLRDEDFSKIENLKVLILYHTEFSGSPILLSNSLYYILWNGYPFTSLPSNFNPYQLVELNMPDSSIEQLWTGIQHLPCLKRIDLSNSKNLKTTPCFEKILNLERLDLTGCINLLHVHPSIGLLTELVFLSLQNCSSLGSLDFGNAAELWSLKVLRLSDCSKLENTPDFSGVSFLQYLDMDRCASLSTIHESIGALATLRFLSLRDCTNLVGIPESFNKMASLTTLDLRGCSKFTELGCTSTSHLHLQSLIYLDLSFCSISIMPDAIGELICLERLNLQGNNFTSLPSTLNWLHNLSYLNLSHCHKLQSLPLLPTESGPSDSVGRYFKTTSGSRDHRSGFYIFDSPKCMKFVSRNHECLYWFPFGWVLRLIKEPLHFRFGFDVVLPWHGETNGSRGHRAIPKTLTRSWSDKVSELFHHQFKGGSIVRINNSVVNDGWVGFLFFVTFELNNHHVPSSSPHQSHSLPPLPHPFYLSFESEYTEERFDMQLDLERNTVDGKNYLWTIYISREHCHFVETGAQITFKARQGLIIKEWGLRVVTKKDTEGSKMGRSVHLPLQIIDNAEESSNNGSFEPKIQLPYNWLVSDEDKTETDEAKGKETDLFNLGLFTERPQ* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2286 1219 ProSiteProfiles Leucine-rich repeat profile. 879 900 IPR001611 GO:0005515
Mal3g2286 1219 Pfam NB-ARC domain 263 475 IPR002182 GO:0043531
Mal3g2286 1219 PRINTS Disease resistance protein signature 273 288 - -
Mal3g2286 1219 PRINTS Disease resistance protein signature 351 365 - -
Mal3g2286 1219 PRINTS Disease resistance protein signature 444 458 - -
Mal3g2286 1219 PRINTS Disease resistance protein signature 825 841 - -
Mal3g2286 1219 ProSiteProfiles TIR domain profile. 70 237 IPR000157 GO:0007165
Mal3g2286 1219 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 773 848 IPR044974 GO:0006952
Mal3g2286 1219 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 66 772 IPR044974 GO:0006952
Mal3g2286 1219 Gene3D - 240 403 IPR027417 -
Mal3g2286 1219 Gene3D Ribonuclease Inhibitor 849 933 IPR032675 -
Mal3g2286 1219 Gene3D Ribonuclease Inhibitor 749 848 IPR032675 -
Mal3g2286 1219 SUPERFAMILY Toll/Interleukin receptor TIR domain 63 215 IPR035897 -
Mal3g2286 1219 SUPERFAMILY L domain-like 615 919 - -
Mal3g2286 1219 Pfam TIR domain 72 242 IPR000157 GO:0007165
Mal3g2286 1219 Gene3D - 66 239 IPR035897 -
Mal3g2286 1219 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 66 772 - -
Mal3g2286 1219 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 806 917 - -
Mal3g2286 1219 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 773 848 - -
Mal3g2286 1219 Pfam Leucine Rich Repeat 663 682 IPR011713 -
Mal3g2286 1219 Gene3D Ribonuclease Inhibitor 598 748 IPR032675 -
Mal3g2286 1219 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 806 917 IPR044974 GO:0006952
Mal3g2286 1219 SUPERFAMILY "Winged helix" DNA-binding domain 481 581 IPR036390 -
Mal3g2286 1219 Gene3D - 410 493 IPR042197 -
Mal3g2286 1219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 242 502 IPR027417 -
Mal3g2286 1219 SMART till_3 71 212 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2286 Mal-Chr3 92100379 92105703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2286 72 939 WRKY Transcription Factor Family AT4G12020 29.021 3.02e-77 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2286 - - mtr:MTR_7g069120 1394.79