Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2275 ATGGAGGGTCATCATCTCCATCATCATCAACAACATCATCAACAACATCAACAAAGACAACAACAACAACATCAACAACATGCTCATAACATCATAGGTACTAGTAGTGTTAACGTTGATGTCACGGATAGATTTCCTCAATGGAGCATCCAAGAAACAAAGGAGTTTCTTATGATCCGTTCAGAATTAGATCAAACTTTCATGGAGACAAAGAGAAACAAACAGCTTTGGGAAGTTATCTCTAACAATATGAAGGAAAAGGGTTATCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAATCTTGTTACTCGCTATAAGGGATGTGAAACAATGGAGCTAGAAGCCACGAGACAACAATTTCCATTTTACAATGAGCTTCAAGCTATTTTTAGTGCAAGGATGCAAAGAATGTTGTGGGCTGAAGCAGAAGGAGGGTCAAAGAAGAAAGGGGTGCATGTGTCTTCTGAGGATGAGGAAGAGTTAGGCAATGAAGAAAGTGAGGGAGATCACAAGGGCAACATTAAGAAGAAGAAGAAAAAGGGTAAAATGGTAATTGGTGGAGGAAATGATAATAGTGGTAGCAACAATTTGAAGGAGATTCTTGAGGAGTTTATGAGGCAACAAATGCAAATAGAAGCTCAATGGATGGAAGCATTTGAGGCAAGGGAGAATGAGAGGAGGTTGAAGGAGATGGAGTGGAGGCAAACAATGGAAGCATTGGAGAATGAGAGGATAATGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGAAGGCTTAGAGAAGAAGCTAGGGCTGAAAAGAGAGATGCATTAATCACAGCTTTGCTTGATAAGCTTACAAGAGAAGACATGTAG 864 0.3993 MEGHHLHHHQQHHQQHQQRQQQQHQQHAHNIIGTSSVNVDVTDRFPQWSIQETKEFLMIRSELDQTFMETKRNKQLWEVISNNMKEKGYHRSAEQCKCKWKNLVTRYKGCETMELEATRQQFPFYNELQAIFSARMQRMLWAEAEGGSKKKGVHVSSEDEEELGNEESEGDHKGNIKKKKKKGKMVIGGGNDNSGSNNLKEILEEFMRQQMQIEAQWMEAFEARENERRLKEMEWRQTMEALENERIMMEQRWREREEQRRLREEARAEKRDALITALLDKLTREDM* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2275 287 Coils Coil 196 216 - -
Mal3g2275 287 CDD GT1 46 111 - -
Mal3g2275 287 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 285 - -
Mal3g2275 287 Gene3D - 48 109 - -
Mal3g2275 287 ProSiteProfiles Myb-like domain profile. 48 104 IPR001005 -
Mal3g2275 287 MobiDBLite consensus disorder prediction 147 197 - -
Mal3g2275 287 PANTHER - 1 285 - -
Mal3g2275 287 Coils Coil 232 276 - -
Mal3g2275 287 MobiDBLite consensus disorder prediction 1 28 - -
Mal3g2275 287 Pfam Myb/SANT-like DNA-binding domain 47 131 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2275 Mal-Chr3 91693368 91694677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2275 23 285 Trihelix Transcription Factor Family AT2G38250 55.797 8.12e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal3g2275 Myb_DNA-bind_4 1.4e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2275 3 91693368 91694677 Mal3g2275 3 91693368 91694677 ECH