Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2274 ATGGGTAACTGCTGCAGATCTCCGGCCGCCGTCGCACGTGAAGATGTCAAATCCTCTTTCTCCAACCACGACCACCCCAAACGCACTGAAACCACCTCCACCAAAAAATCCCCTCCTCCGGTCACTGTCCTCGCCGCCACCAAAACCTCCGACAACATGGAAGACCGTTACCTCATCGACCGTGAACTCGGCCGCGGCGAATTCGGTGTAACCTACCTTTGCATCGACCGTGACACTCGCGAGCTTCTCGCTTGCAAAAGTATCTCTAAACGGAAGCTGAGAACTGCCGTTGATGTGGATGATGTTCGCCGGGAAGTTGCTATCATGCGCCATTTGCCGAAGAGTTCGAGTATTGTGACGCTTCGTGAAGCGTGTGAGGATGAGAATGCTGTTCATCTTGTTATGGAGCTTTGTGAAGGTGGGGAGCTTTTTGATCGGATTGTTGCTAGAGGGCATTATACGGAGAGGGCGGCGGCTGCGGTTGCCAGGACGATTGTGGAGGTTGTGCAGCTTTGTCATAAGCATGGGGTTATTCATCGCGATCTTAAGCCGGAGAATTTCTTGTTTGCGAATAAAAAGGAGAATTCGCCGCTTAAAGCTATTGATTTTGGGTTGTCTATATTCTTCAAGCCAGGTGAAAAATTCTCAGAAATTGTTGGAAGTCCATATTATATGGCTCCAGAGGTGCTCAAGCGGAACTATGGACCGGAAATTGATATATGGAGTGCAGGAGTGATACTCTATATCTTATTGTGTGGTGTTCCCCCATTTTGGGCTGAATCTGAGCAAGGAGTTGCACAGGCTATTCTTCGAGGGCTTATAGATTTCAAACGGGAACCTTGGCCCAGTATTTCTGAAAGTGCGAAAAGTCTTGTTAAGCAAATGTTAGAACCAGACCCCAAGCTTCGATTAACAGCCAAACAAGTGCTTGAGCATCCTTGGCTCCAAAATGCTAAGAAGGCTCCAAATGTTCCTCTTGGAGACGTTGTCAAGTCAAGGCTTAAGCAATTCTCAATGATGAATAGATTCAAAAGAAAAGCCCTTAGGGTCATTGCTGATTTCTTATCCAATGAAGAAGTTGAAGACATCAAAGAGATGTTCAAGAAGATGGATACTGATAATGATGGAATTGTTTCCATTGAAGAACTAAAAGCTGGATTCCGAAACTATCAGTCTCAACTTGCTGAGTCTGAAGTTCAGATGTTTATTGAAGCTGTAGATAATAATGGTAAGGGAACACTAGATTACGGAGAATTTGTTGCCATTTCCCTTCATTTAAAAAGGATGGCAAATGACGAGCATCTTCACAAGGCCTTCTCCTATTTTGACAAGGATGGGAATGGATATATTGAACCAGAAGAGCTACGGAATGCCTTGATGGAAGATGGAACTGATGACTGTACAGATGTAGCAAATGATATTTTCCAAGAAGTAGACACAGACAAGGACGGAAAAATCAGCTATGATGAATTTGTGGCTATGATGAAAACTGGAACGGATTGGAGAAAAGCTTCTCGACATTACTCACGTGGGAGATTCAATAGCTTGAGCTTAAAGTTAATGAAAGACGGTTCTTTAAACTTAGGAAATGAGTAG 1596 0.4436 MGNCCRSPAAVAREDVKSSFSNHDHPKRTETTSTKKSPPPVTVLAATKTSDNMEDRYLIDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDVDDVRREVAIMRHLPKSSSIVTLREACEDENAVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGEKFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGLIDFKREPWPSISESAKSLVKQMLEPDPKLRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIADFLSNEEVEDIKEMFKKMDTDNDGIVSIEELKAGFRNYQSQLAESEVQMFIEAVDNNGKGTLDYGEFVAISLHLKRMANDEHLHKAFSYFDKDGNGYIEPEELRNALMEDGTDDCTDVANDIFQEVDTDKDGKISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSLKLMKDGSLNLGNE* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2274 531 CDD EFh 434 496 IPR002048 GO:0005509
Mal3g2274 531 Pfam EF-hand domain pair 433 496 IPR002048 GO:0005509
Mal3g2274 531 Pfam EF-hand domain pair 361 422 IPR002048 GO:0005509
Mal3g2274 531 ProSiteProfiles EF-hand calcium-binding domain profile. 430 465 IPR002048 GO:0005509
Mal3g2274 531 Gene3D - 324 499 - -
Mal3g2274 531 ProSitePatterns EF-hand calcium-binding domain. 443 455 IPR018247 -
Mal3g2274 531 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Mal3g2274 531 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2274 531 Coils Coil 380 400 - -
Mal3g2274 531 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2274 531 ProSiteProfiles EF-hand calcium-binding domain profile. 394 429 IPR002048 GO:0005509
Mal3g2274 531 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 13 6 512 - -
Mal3g2274 531 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Mal3g2274 531 ProSitePatterns EF-hand calcium-binding domain. 479 491 IPR018247 -
Mal3g2274 531 ProSiteProfiles EF-hand calcium-binding domain profile. 466 501 IPR002048 GO:0005509
Mal3g2274 531 MobiDBLite consensus disorder prediction 15 41 - -
Mal3g2274 531 Gene3D Transferase(Phosphotransferase) domain 1 143 323 - -
Mal3g2274 531 SUPERFAMILY Protein kinase-like (PK-like) 44 340 IPR011009 -
Mal3g2274 531 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 512 - -
Mal3g2274 531 MobiDBLite consensus disorder prediction 17 32 - -
Mal3g2274 531 CDD STKc_CAMK 56 314 - -
Mal3g2274 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Mal3g2274 531 SMART efh_1 434 462 IPR002048 GO:0005509
Mal3g2274 531 SMART efh_1 362 390 IPR002048 GO:0005509
Mal3g2274 531 SMART efh_1 398 426 IPR002048 GO:0005509
Mal3g2274 531 SMART efh_1 470 498 IPR002048 GO:0005509
Mal3g2274 531 Pfam Protein kinase domain 59 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2274 531 Gene3D Phosphorylase Kinase; domain 1 58 142 - -
Mal3g2274 531 ProSitePatterns EF-hand calcium-binding domain. 371 383 IPR018247 -
Mal3g2274 531 SUPERFAMILY EF-hand 344 522 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2274 Mal-Chr3 91641940 91652091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2274 1 528 EF-hand Containing Proteins AT1G74740 67.978 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal3g2274 Pkinase 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2274 K13412 - gmx:100783922 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2274 3 91641940 91652091 Mal3g2274 3 91641940 91652091 ECH