Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2258 ATGGCAACTTCAAAAAGTGAGACCAAGGGAAAGGTCATTACTTGCAAAGCCTTTGTGGCACATGCTGCGGGAGAACCCTTGGTAATGCAACAAATTGTTGTACAACCTCCACAGAAAATGGAGGTTCGAATCAAGATCCTTTATACTTCCATTTGTCACACCGATCTTGGTGGTTGGAAAGGAGAGTCTGAACCTCAACGGGCATTTCCTCGGATTTTTGGTCATGAAGCTTCCGGGATTGTGGAGAGTGTTGGAGAAGGAGTGAATGACATGAAAGAAAATGACAAAGTGGTGATAATATTCAACGGGGAGTGTGGTGATTGTGCATATTGTACATGTGAGAAAACCAACATGTGTGAGAAGTATGGGGTAAACCCAATGAAGAGATTAATGTGTGATGGTACAAGTAGATTCTCTACCATAGATGGCAAACTCATTTACCATTTCTTGAACAGTTCAACTTTCACAGAGTACACGGTGGTGGATTCAGGTTGTGTTGTTAATATCAACACTGAAGACACCGTTAACCTAAAAAAACTCACCATGCTTAGTTGTGGAGTTTCCACAGGAATTGGAGCTGCTTGGAATAATGCTCGTGTGCATGCTGGTTCATCAGTAGCAATCTTTGGTTTAGGTGCAATTGGGCTCGCTGTTGCACAAGGGGCACGAGCCAGAGGTGCTTCAAAAATAATAGGTGTAGATGTCAACCCAGAGAAATTAACCATAGCCAAAGCAATGGGAATCACAGACTTCATAAATCCAAGGGATGAAGAGAAGCCTACAGTTGAGAAAATCAGAGAAATGACTGGGGGAGGTGTACATTACAGTTTTGAATGTACAGGAAACGTGAACGTTCTAAGGGATGCCTTCTTGTCTTGTCATGAGGGTTGGGGATTGACTATACTAGTGGGAATTCATGCATCACCAAAGTTACTTCCTATCCACCCAATGGAGCTCTTTGATGGTCGCAGAATCGAAGGATCAATCTTTGGAGGTTTCAAAGGCAAAAGTCAATTGCCTAATCTTGTCACAGAAAGCATGAAAGGGGCGATAAAGTTGGATGATTTCATCACTCACGAACTTCCCTTTGACGAGATAAACAAAGCCTTCGATCTTTTGATTGCTGGGAAGTCACTTAGATGTCTTCTGACACTTTAA 1158 0.4249 MATSKSETKGKVITCKAFVAHAAGEPLVMQQIVVQPPQKMEVRIKILYTSICHTDLGGWKGESEPQRAFPRIFGHEASGIVESVGEGVNDMKENDKVVIIFNGECGDCAYCTCEKTNMCEKYGVNPMKRLMCDGTSRFSTIDGKLIYHFLNSSTFTEYTVVDSGCVVNINTEDTVNLKKLTMLSCGVSTGIGAAWNNARVHAGSSVAIFGLGAIGLAVAQGARARGASKIIGVDVNPEKLTIAKAMGITDFINPRDEEKPTVEKIREMTGGGVHYSFECTGNVNVLRDAFLSCHEGWGLTILVGIHASPKLLPIHPMELFDGRRIEGSIFGGFKGKSQLPNLVTESMKGAIKLDDFITHELPFDEINKAFDLLIAGKSLRCLLTL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2258 385 Gene3D - 19 380 - -
Mal3g2258 385 Gene3D - 190 328 - -
Mal3g2258 385 PANTHER ALCOHOL DEHYDROGENASE 8 384 - -
Mal3g2258 385 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 8 384 - -
Mal3g2258 385 SUPERFAMILY GroES-like 335 384 IPR011032 -
Mal3g2258 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 176 349 IPR036291 -
Mal3g2258 385 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Mal3g2258 385 SUPERFAMILY GroES-like 8 201 IPR011032 -
Mal3g2258 385 Pfam Zinc-binding dehydrogenase 213 335 IPR013149 -
Mal3g2258 385 Pfam Alcohol dehydrogenase GroES-like domain 41 135 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2258 Mal-Chr3 91199828 91206073 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2258 41 342 Monolignol Biosynthesis Gene Families AT4G37990 25.658 3.58e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2258 K00001 - gmx:100787307 597.816