Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2253 ATGACAAAGGGCAAGGGAACAGGAAAGACTTCAAGGGAATTACTGAAACCAGTTGATGACCGAAAACTAGGAAAGCGAAAGGCTGCTGCTAAACCTGAGAAGGTGCCGAAGACTAAGAAGGAGAAGAAGGCCAAGAAAGATCCCAACAAACCAAAAAGACCTCCCAGCGCTTTCTTTGTTTTCCTTGAGGATTTCAGAAAGACTTTTAAGGCAGAGAACCCTCATGTGAAGGCCGTATCAGCTGTTGGAAAGGCTGGAGGAGAGAAATGGAAATCTTTGACTAAGGCTGAAAAAGCTCCATATGAAGCCAAGGCTGCAAAGAGGAAAGTTGAGTATGAAAAACTTATGAATGCTTATAATAACAAGCCAAGTTCAGCAGACGATGACGAGGAGGAGGAATCAGACAAGTCCAAATCTGAAGTTAATAATGAAGATGAAGCAAGTGGAGAGGATGACCACCAAGATGACGAGGACGAGGATGACGAGGACGAAGAAGACGATGATGATGAAGACGATGATTGA 522 0.4387 MTKGKGTGKTSRELLKPVDDRKLGKRKAAAKPEKVPKTKKEKKAKKDPNKPKRPPSAFFVFLEDFRKTFKAENPHVKAVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKVEYEKLMNAYNNKPSSADDDEEEESDKSKSEVNNEDEASGEDDHQDDEDEDDEDEEDDDDEDDD* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2253 173 MobiDBLite consensus disorder prediction 1 56 - -
Mal3g2253 173 PANTHER HIGH MOBILITY GROUP B PROTEIN 1 2 161 - -
Mal3g2253 173 CDD HMGB-UBF_HMG-box 51 116 - -
Mal3g2253 173 MobiDBLite consensus disorder prediction 117 173 - -
Mal3g2253 173 Gene3D High mobility group box domain 34 139 IPR036910 -
Mal3g2253 173 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 2 161 IPR031061 -
Mal3g2253 173 SUPERFAMILY HMG-box 42 125 IPR036910 -
Mal3g2253 173 MobiDBLite consensus disorder prediction 145 173 - -
Mal3g2253 173 Pfam HMG (high mobility group) box 51 120 IPR009071 -
Mal3g2253 173 SMART hmgende2 50 121 IPR009071 -
Mal3g2253 173 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 51 120 IPR009071 -
Mal3g2253 173 MobiDBLite consensus disorder prediction 9 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2253 Mal-Chr3 91105661 91107749 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal3g2253 HMG_box 2.7e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2253 K25507 - egr:104419103 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2253 3 91105661 91107749 Mal3g2253 3 91105661 91107749 ECH