Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2241 ATGATTTGCAAATGTTTTGGTGTCTTGAATTGGTGTAAAGGGAAGGGTGAACTTGCAGAGCAGCCACATGAACAAGTGATGAAAACTAAAAGCTTCAGCTATAACTCATTGAGATCTGCTACTGGAGAATTTCATCCTTCATGTAAAATTGGTGGAGGAGGCTATGGAGTTGTATACAAGGGAGTTTTAAGGGATGGTACTCAAGTTGCTATTAAGTCTCTTTCTGTAGAGTCTAAACAAGGAACTCATGAATTTATGACAGAAATTGATATGATATCAAATATACAACATCCAAATCTTGTGAAACTAATTGGCTTCTGTATCGAGGATAATCATCGAATATTGGTGTACGAGTTTCTAGAGAACAATAGCCTCGCAAGTTCTTTGCTAGGTTCGAAAAGTAAATGCGTTCCTCTGGATTGGCGAAAGAGGGCTACAATTTGCTGCGGTACAGCTTCTGGTTTAAGCTTTCTTCATGAAGAGGCCCAGCCAAATATTGTTCACAGAGATATCAAGGCTAGCAACATATTGTTAGATGAGAACTTCAATCCAAAAATCGGTGATTTCGGTCTTGCAAAACTCTTTCCTGACAACGTTACACATGTTAGTACCAGAGTTGCAGGAACAATGGGATATCTTGCGCCAGAATATGCGCTTCTAAGACAGCTTACAAAGAAAGCCGATGTATATAGTTTTGGGATTCTGATGCTTGAAATAATCAGTGGTAAAAGTAGCAGCAAAGCTGCATTTGGAGACAATATTTTGGTTCTGGTGGAATGGGCTTGGAAGCTGAAAGAAGAAAACCGGCTTCTGGAACTTGTTGATTCAGAAATAACCGACTATGATGAGAACGAGGTGTATCGGTTCCTTGTGATTGCTCTATTTTGCACCCAATCAGCAGCTCAGCATAGACCAACCATGAAACAAGTAGTACAAATGCTTTCCAAACAAGTTCATCTAAATGAGAAAGCATTGACTGAGCCAGGAATATACAGATGGAATACCTCTGGAAAAACGAGCGGTTCTTTGAACGAGATATCGTCGTCATCTCAAGTAATCATGCACAAAAAATATGAAAATCGACATCAAACCTCTACACAATTTAGCGGTACAGATATTGTGACAGAGATGTTTCCTAGATGA 1143 0.3937 MICKCFGVLNWCKGKGELAEQPHEQVMKTKSFSYNSLRSATGEFHPSCKIGGGGYGVVYKGVLRDGTQVAIKSLSVESKQGTHEFMTEIDMISNIQHPNLVKLIGFCIEDNHRILVYEFLENNSLASSLLGSKSKCVPLDWRKRATICCGTASGLSFLHEEAQPNIVHRDIKASNILLDENFNPKIGDFGLAKLFPDNVTHVSTRVAGTMGYLAPEYALLRQLTKKADVYSFGILMLEIISGKSSSKAAFGDNILVLVEWAWKLKEENRLLELVDSEITDYDENEVYRFLVIALFCTQSAAQHRPTMKQVVQMLSKQVHLNEKALTEPGIYRWNTSGKTSGSLNEISSSSQVIMHKKYENRHQTSTQFSGTDIVTEMFPR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2241 380 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2241 380 Pfam Protein kinase domain 47 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2241 380 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Mal3g2241 380 Gene3D Phosphorylase Kinase; domain 1 15 119 - -
Mal3g2241 380 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 351 - -
Mal3g2241 380 Gene3D Transferase(Phosphotransferase) domain 1 120 329 - -
Mal3g2241 380 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 351 - -
Mal3g2241 380 SUPERFAMILY Protein kinase-like (PK-like) 24 314 IPR011009 -
Mal3g2241 380 CDD STKc_IRAK 63 316 - -
Mal3g2241 380 SMART serkin_6 44 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2241 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2241 Mal-Chr3 90851073 90853660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2241 27 329 Receptor kinase-like Gene Family AT1G56120 52.475 2.20e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal3g2241 Pkinase 5.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2241 - - gmx:100816683 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2241 3 90851073 90853660 Mal3g2241 3 90851073 90853660 ECH