Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2240 ATGGGTGATGTTAGTGCTATAGAGACCAACAATAGAATAAGTTTTGATTTGAATGAAAGTCTAATAGAAGATATTGCTCTAGAAAATGGTTGTTCAGAATTGTTAGTAGTTGATAACATAGGAAGTTCTGAGAAAGAAAGCTCTGCTTCATGTTTGAATATTGTAACAAATGAAGAAGGTGATAAAGATGGGTCTTGTAATGAGAGAAGTTGTGTTCCCTTTGTTGGTCAAATTTTTCTTAGTGAAGAAGAAGCATTTGTCTTTTATAAGAAATATGCTTATCAACAAGGGTTCTCAATAAAAAAAGGTAGATTCACAAACAAAAATGGGGTTATCAGCAGGCGTGATTTTTTTTGCCATCGTGAAGGTAGAGCATCCTTGAAAATCATGGAACCATCAAAAGAGCAGAGAAATAGAGAATCATCAAAGTGTGATTGCAAAGCTCATTTACGAATTAAATTGCAAAAGTCTCATGATATATTTCCAACTGAGTGGCGAGTTACGTTTGTTGTTGAACATAATCATGGTTTGCTAACCCCATCAGAGGTGCGTTTTTTACCGGCTTATCGAACTATCTTAGAAGATGATCGTGAGCGTATTTTCTTATTAAAAGAAGGTGGACTTTCATTAATTTGTTGTTCTCTTCTGTAA 651 0.3425 MGDVSAIETNNRISFDLNESLIEDIALENGCSELLVVDNIGSSEKESSASCLNIVTNEEGDKDGSCNERSCVPFVGQIFLSEEEAFVFYKKYAYQQGFSIKKGRFTNKNGVISRRDFFCHREGRASLKIMEPSKEQRNRESSKCDCKAHLRIKLQKSHDIFPTEWRVTFVVEHNHGLLTPSEVRFLPAYRTILEDDRERIFLLKEGGLSLICCSLL* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2240 216 Pfam FAR1 DNA-binding domain 88 178 IPR004330 -
Mal3g2240 216 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 202 IPR031052 GO:0006355
Mal3g2240 216 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 43 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2240 Mal-Chr3 90770426 90771076 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g2240 FAR1 2.5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2240 - - mtr:MTR_4g035820 315.849