Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2216 ATGATGAGCAGTTCAAGTGTGATCATCTCCAAGAAGATATTAATCCAATTCCTTTGTGGTTTTCTTTTATACATTAGCAAATATCATTACTCTTCAACTGCATCAACCTTGCAAGGAAATGAAACAGATTTACAAGCTTTACTTAACTTCAAGAGTAGAATAACTCAAGATCCATTTCAAACACTAAGTTTGTGGAATGATTCAATCCACCACTGCAACTGGTTAGGAATCACTTGTAACATCTCCAATGGAAGAGTCATGCATTTGATCCTTGCAGACATGACACTAGCTGGAACTCTTTCACCATCAATAGGAAATCTTACATACCTCACAAAACTCAACCTTAGAAATAGTAGTTTCCATGGAGAGTTTCCTCAACAAGTTGGAAATTTACTATATCTTCAACATCTCAATATTAGTTATAATTCTTTTGGTGGTAGCATTCCAAGTAATCTAAGTCATTGCATAGAGCTAAGTATATTATCTTCTGGTCATAACAATTTCATAGGAACAATTCCAACATGGATAGGAAATTTTTCTTCTTTATCTCTACTTAATCTAGCTGTTAACAATTTGCATGGAGTCATACCAAATGAGGTAGGAAAATTATCAAGGCTAACACTTTTTGCACTAAATGGAAATCACTTGTATGGAAAAGTTCCTACTTCAGTTTTTAATATTTCTTCCTTATCCTTTCTCACCTTTTCTCAAAATAATTTGCATGGTAACTTACCTTCTGATGTTGGTTTTACTCTTCCTAATCTTGAAACATTTGCTGGTGGAGTCAATAATTTCACTGGAACAATACCTGAATCACTTTCAAATGCTTCAAGATTGGAAATTCTTGATTTTGCTGAAAATGGTCTCATTGGAACTCTTCCTAAGAACATAGGAAGATTGACTCTTTTGAAAAGACTAAATTTTGATACCAATAGACTTGGAAATGGTAAAGATGGTGACCTGAATTTTCTTACATCTTTGATTAATTGTACTTCTCTTGAAGTTTTAGGTCTTGCTGAAAATAGTTTTGGAGGAGAATTGCCCAGCTCAATTGCTAATCTTTCAACCAATTTGAATGAACTTGATTTAGGTCAAAATTCTTTATATGGAAGTATCCCTATTGGAATAAGTAACCTTGTTAACTTGACCAGTTTGGGATTGGGAAAGAATAACCTAAGTGGTTTTGTTCCTGATACAATATGTATGCTTCAAAAGCTGGTTGATTTAGAATTGTATAGCAACAAATTTTCTGGTGTGATTCCTTCCTCCATTGGAAACTTGACTAGATTAACAATGCTACTCATAGATGATAACAATTTTGAGGGAAGTATACCAACAAGTCTTGGAAATTGCCAAAGCTTGTTGATGCTAAATTTGAGTCATAACAAGCTCAATGGTGCCATACCAAGACAAGTATTTACCTTGTCTTCTCTTTCAATATACTTAGACTTGTCTCATAATTTTCTCATAGGGTCCTTGCCCTTTGAAATAGGTAAGCTAGTTAATCTTGCAACTTTGGATCTATCAAAGAACAAATTGTCCGGCACGATTCCGTCCTCACTTGGAAGTTGTGCTAGTTTGGAATGGCTGCATATGCAGGGTAACTCTTTTGAGGGAAGCATTCCTTCAACTATACAGAATTTAAGAGGTATACAAGATATTGATCTTTCATGGAATAACTTATCTGGGAAGATTCCTGAATTTCTCGGTCAGATTAAAGGGCTAATGCATCTCAATCTTTCGTACAATGATTTGGAGGGAGAATTACCAATGAACGGAATCTTCAAAAATGCAACTTCTTTTTCAATCAATGGAAACATTAAGCTTTGTGGTGGTGTTTCAGAATTGAATTTACCTGCATGCACTATCAAAAAATCAAAATTTCATAGCCTAAAGGTCATTATCCCTATAGCTAGTGCACTTGTATTTGTACTCTTTCTCTCTTGTTTTCTAATAATCATCATGATAAAAAGATCAAGAAAGAAAACTTCAAGAGAAACAACTACTATAAAGGATTTGGAACTGAACATTTCTTACTCGGAAATTGCGAAGTGTACCGATGGATTCTCCGAGGATAACTTGATTGGCTCAGGAAGTTTTGGTTCTGTGTACAAAGGAACTCTTTCAAGTGATGGAACAGTTATTGCAATTAAAGTGTTGAATCTTGAACAACGAGGAGCTTCAAAAAGCTTCATTGATGAATGCAATGTTCTGAAAGTTATAAGGCACCGCAACCTTCTCAAGATCATAACCGCTATCTCAAGTGTTGATCATCAAGGTAATGACTTCAAAGCTCTTGTGTATGAGTTCATGTCCAATGGAAGTCTAGAAGATTGGTTGCACCCTATAAATCAGACGAAAACGCTAACATTTGTACAAAGACTAAACATAGCAATTGATATTGCTTGTGCACTTGAATATCTTCACCACTTTTGTGAAGCTCCAATTGTTCATTGTGACATAAAGCCAAGCAATGTACTACTTGACAATGATATGGTAGCACATGTTGGTGACTTTGGTTTAGCTACATTTCTGTTCGAAGAATCATGTGATTCTCCCAAACATTCAACCATGTCAGCTATCCTAAAGGGCTCTATTGGGTACATCCCTCCAGAGTATGGAATGGGTGGACACCCTTCTGCACTTGGAGATATTTACAGTTATGGGATACTATTGCTAGAGATTTTCACAGGAAAAGACCAACAAATGAGATTTACCATTTAA 2724 0.3535 MMSSSSVIISKKILIQFLCGFLLYISKYHYSSTASTLQGNETDLQALLNFKSRITQDPFQTLSLWNDSIHHCNWLGITCNISNGRVMHLILADMTLAGTLSPSIGNLTYLTKLNLRNSSFHGEFPQQVGNLLYLQHLNISYNSFGGSIPSNLSHCIELSILSSGHNNFIGTIPTWIGNFSSLSLLNLAVNNLHGVIPNEVGKLSRLTLFALNGNHLYGKVPTSVFNISSLSFLTFSQNNLHGNLPSDVGFTLPNLETFAGGVNNFTGTIPESLSNASRLEILDFAENGLIGTLPKNIGRLTLLKRLNFDTNRLGNGKDGDLNFLTSLINCTSLEVLGLAENSFGGELPSSIANLSTNLNELDLGQNSLYGSIPIGISNLVNLTSLGLGKNNLSGFVPDTICMLQKLVDLELYSNKFSGVIPSSIGNLTRLTMLLIDDNNFEGSIPTSLGNCQSLLMLNLSHNKLNGAIPRQVFTLSSLSIYLDLSHNFLIGSLPFEIGKLVNLATLDLSKNKLSGTIPSSLGSCASLEWLHMQGNSFEGSIPSTIQNLRGIQDIDLSWNNLSGKIPEFLGQIKGLMHLNLSYNDLEGELPMNGIFKNATSFSINGNIKLCGGVSELNLPACTIKKSKFHSLKVIIPIASALVFVLFLSCFLIIIMIKRSRKKTSRETTTIKDLELNISYSEIAKCTDGFSEDNLIGSGSFGSVYKGTLSSDGTVIAIKVLNLEQRGASKSFIDECNVLKVIRHRNLLKIITAISSVDHQGNDFKALVYEFMSNGSLEDWLHPINQTKTLTFVQRLNIAIDIACALEYLHHFCEAPIVHCDIKPSNVLLDNDMVAHVGDFGLATFLFEESCDSPKHSTMSAILKGSIGYIPPEYGMGGHPSALGDIYSYGILLLEIFTGKDQQMRFTI* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2216 907 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
Mal3g2216 907 SMART serkin_6 689 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2216 907 SMART LRR_typ_2 379 402 IPR003591 -
Mal3g2216 907 SMART LRR_typ_2 403 426 IPR003591 -
Mal3g2216 907 SMART LRR_typ_2 452 475 IPR003591 -
Mal3g2216 907 SMART LRR_typ_2 427 451 IPR003591 -
Mal3g2216 907 SMART LRR_typ_2 500 524 IPR003591 -
Mal3g2216 907 SMART LRR_typ_2 131 155 IPR003591 -
Mal3g2216 907 SMART LRR_typ_2 572 597 IPR003591 -
Mal3g2216 907 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524
Mal3g2216 907 SUPERFAMILY Protein kinase-like (PK-like) 667 899 IPR011009 -
Mal3g2216 907 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE, PUTATIVE-RELATED 38 899 - -
Mal3g2216 907 Gene3D Ribonuclease Inhibitor 318 629 IPR032675 -
Mal3g2216 907 Gene3D Ribonuclease Inhibitor 42 194 IPR032675 -
Mal3g2216 907 Gene3D Phosphorylase Kinase; domain 1 651 770 - -
Mal3g2216 907 Gene3D Transferase(Phosphotransferase) domain 1 771 904 - -
Mal3g2216 907 PRINTS Leucine-rich repeat signature 454 467 - -
Mal3g2216 907 PRINTS Leucine-rich repeat signature 500 513 - -
Mal3g2216 907 Gene3D Ribonuclease Inhibitor 195 251 IPR032675 -
Mal3g2216 907 Gene3D Ribonuclease Inhibitor 252 317 IPR032675 -
Mal3g2216 907 Pfam Leucine rich repeat 482 536 IPR001611 GO:0005515
Mal3g2216 907 ProSiteProfiles Protein kinase domain profile. 689 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2216 907 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Mal3g2216 907 SUPERFAMILY RNI-like 91 417 - -
Mal3g2216 907 SUPERFAMILY L domain-like 356 611 - -
Mal3g2216 907 Pfam Protein kinase domain 690 899 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2216 907 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 38 899 - -
Mal3g2216 907 Pfam Leucine Rich Repeat 134 155 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2216 Mal-Chr3 90263134 90266567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2216 40 899 Receptor kinase-like Gene Family AT3G47570 47.556 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mal3g2216 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2216 - - gmx:100785230 1390.56