Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2197 ATGGCTGCTGAATTGAAAAAAGCTACAGATGAAATGAATAAGAAGAAGCTTCATGGTGATTCTTCAACAACTGAACATAATAATTCCAACATGAATGATCACATGTTATGGTGGTTACTATGGAGAGCCAGAAAATCAAGGTATTATGTTGGTGTTGATGTTGTGGATTTTCACTATCCTGTTGCAGTGGCACATATAATTGGGCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTTTCATTTACACACATAATCAAAAGTGGAGAGCCTGCTTTCAGTGTTCTTGTATCAAGATTCTTGCTTGGGCAAGCATTCCCTTTACAAGTTTACCTTTCACTGCTGCCAATTATTGGAGGTTGTGCACTTGTTGTTGTCACAGAACTTAATTTCAATATGATTGGGTTTATGGGGGCTATGTGGCCTTTGTGTTTAGGAATATATGCTTGCCTCTCTATATTGTCTCTATTGCTTCTCACCCCTTTTGCTATTGTTGTGGAAGGCCCAAAGATGGTGTTGTACTTCCAGAGTGGGAGATTTGGAAAACTTAACAAGAGAGTAACCTTCCCTGAGACTTTAAATCTTAGCCCTTACACGAGTGAAGCTGGAGATGGTTCTTATATCTATAATTTATATGTTGTTGTAGTCCATATTGATATGCTAAATGCTTCATTTTTTGGTCATTACATCTGCTACATTAAGGATTTCCGAGGAAACTGGTACATGATTAATGACTCAAAGGTTGCTTGTGTGGAATTGGAGGAGGTGCTTTCTCAGGGAGCATACATGTTGTTGTATAGAAGGTGTACTGCACGACCATCAAGCCCTCAAATTCAAACTACTGAATCTTCAGGGAAAGTAGAAGAGCGAACAGTGGAAGTGGAACCTGGAAAAACTGAACAAGCTGAATCTTCTGGTTTTGGTTGTTTGTTTTTAGCTTCCAATTCTTTAGTATTTCTACCTGCAGTTCTTTCTATCTTTGGCAGCTATTAG 996 0.3886 MAAELKKATDEMNKKKLHGDSSTTEHNNSNMNDHMLWWLLWRARKSRYYVGVDVVDFHYPVAVAHIIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGQAFPLQVYLSLLPIIGGCALVVVTELNFNMIGFMGAMWPLCLGIYACLSILSLLLLTPFAIVVEGPKMVLYFQSGRFGKLNKRVTFPETLNLSPYTSEAGDGSYIYNLYVVVVHIDMLNASFFGHYICYIKDFRGNWYMINDSKVACVELEEVLSQGAYMLLYRRCTARPSSPQIQTTESSGKVEERTVEVEPGKTEQAESSGFGCLFLASNSLVFLPAVLSIFGSY* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2197 331 SUPERFAMILY Multidrug resistance efflux transporter EmrE 39 128 - -
Mal3g2197 331 Gene3D Cysteine proteinases 171 275 - -
Mal3g2197 331 Pfam Ubiquitin carboxyl-terminal hydrolase 182 267 IPR001394 GO:0004843|GO:0016579
Mal3g2197 331 Pfam Triose-phosphate Transporter family 49 141 IPR004853 -
Mal3g2197 331 SUPERFAMILY Cysteine proteinases 171 271 IPR038765 -
Mal3g2197 331 MobiDBLite consensus disorder prediction 1 26 - -
Mal3g2197 331 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1 270 IPR028889 -
Mal3g2197 331 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g2197 331 PANTHER SOLUTE CARRIER FAMILY 35 148 184 - -
Mal3g2197 331 PANTHER SOLUTE CARRIER FAMILY 35 59 141 - -
Mal3g2197 331 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 148 184 - -
Mal3g2197 331 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 59 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2197 Mal-Chr3 89891469 89895705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2197 59 172 Antiporters AT5G54800 68.657 4.18e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2197 K11855 - gmx:100820594 209.534