Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2182 ATGAGTGGGAATGAAGGGATAGTGTCAGAACAAGATGTTGAGAGCCAAGAACTTCATCAATTCATGAACCCACAACAGCAACTAAATAAACCAAATACCACCACCACCACCACCACCACCAACCATCGTGCATCATCCTCTGGTGTAGCTCATCGTCCCCGAGGGCGTCCTGCTGGATCGAAGAACAAGCCCAAGATGTCTGCCATAATAACACATGACAACTCCAATGCTCCTAGTTCTCATGTGCTTGAGATCACGGCCGGATCTGAAGTGTTAAAAAGTATCTTTGATTTTGCTCACCATAAAGGGAAGGTAATCTGCATCCTTGACGGAAAAGGAGTTGTGGAGGATGTAACGCTTCGTCAAGCCACAGGGAGAAATCTAACCCTAAAGGGAAGATTTGATATTCTTTCGATTTCTGGGACAATTTTCCCATCGCAAACATCGACGAGTGTAGGAGGTTTGACAATTTACTTATCAGGAACTACAGGCCAAGTTATCGGGGGGCATGTGATCCACCCTTTGGTGGCCTTGGGTACAATTAAGTTGACTGTTGTGTCCTTTGCAAATATTGGATCTGAAAAGTTATGCTCGGCTAGCTATGGTCGGGAAGAACATGAATCGTCAAGCCTCGATGTAGCTAGACACGTGGCTGAAGGTGATGGTGGTTTTTCCAATGTTGGAGGATCAATATCTGGAATGAGGAACATGATGAGTAGTAACATCAACCAGCCCTCATCCTCTGCTACAATTCGTCTATTTGGACGTGATTGTACTGAAAATTTGCCACCTAATTAA 798 0.4474 MSGNEGIVSEQDVESQELHQFMNPQQQLNKPNTTTTTTTTNHRASSSGVAHRPRGRPAGSKNKPKMSAIITHDNSNAPSSHVLEITAGSEVLKSIFDFAHHKGKVICILDGKGVVEDVTLRQATGRNLTLKGRFDILSISGTIFPSQTSTSVGGLTIYLSGTTGQVIGGHVIHPLVALGTIKLTVVSFANIGSEKLCSASYGREEHESSSLDVARHVAEGDGGFSNVGGSISGMRNMMSSNINQPSSSATIRLFGRDCTENLPPN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2182 265 ProSiteProfiles PPC domain profile profile. 75 214 IPR005175 -
Mal3g2182 265 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 21 233 - -
Mal3g2182 265 Gene3D - 80 211 - -
Mal3g2182 265 MobiDBLite consensus disorder prediction 1 47 - -
Mal3g2182 265 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 189 IPR005175 -
Mal3g2182 265 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 233 IPR014476 GO:0003680
Mal3g2182 265 MobiDBLite consensus disorder prediction 1 65 - -
Mal3g2182 265 PIRSF ESCAROLA 1 261 IPR014476 GO:0003680
Mal3g2182 265 CDD DUF296 81 188 IPR005175 -
Mal3g2182 265 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2182 Mal-Chr3 89392113 89392910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2182 52 190 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 47.482 1.48e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2182 - - cam:101492608 179.104