Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2181 ATGAGTGGGAAAGAAGGGATAGTGTCAGAACAAGATGTTGAGAGCCAAGAACTTCATCAATTCATGAACCCACAACAGCAACTAAATAAACCAAATACCACCACCACCACCACCACCACCAACCATTGTGCATCATCCTCTGGTGTAGATCATCGTCCCCGAGGGCGTCCTGCTGGATCGAAGAACAAGCCCAAGATGTCTGCCATAATAACACATGACAACTCCAATGCTCCCAGTTCTCATGTGCTTGAGATCACGGCCGGATCTGAAGTGTTAAAAAGTCTCTTTGATTTTGCTCACCATAAAGGGAAGGTAATCTGCATCCTTGACGGAAAAGGAGTCGTGGAGGATGTAACGCTTCGTGAAGCCACAGGGAGAAATCTAACCCTAAAGGGAAGATTTGATATTCTTTCGATTTTTGGGACAATTTTCCCATCACAGACATCGACGAATGTAGGAGGTTTGACAATTTACTTATCAGGAAGTACAGGCCAAGTTATCGGTGGGCATGTGATCCACCCTTTTGTGGCCTTGGGTACAATTAAGTTGACTGTTGTGTCCTTTGCAAATATTGGATCTGAAAAGTTATGCTCGACTGGCTATGGTCGGGAAGAACATGAATCGTCAAGCCTCGATGTAGCTAGACACGTGGCTGAAGGTGATGGTGGTTTTTCCAATGTTGGAGGATCAATATCTGGAATGAGGAACATGATGAGTAGTAACATCAACCATCCCTCATCCTCTGCTACGATTCGTCTATTTGGACGTGATTGTACTGAAAATTTGCCACCTAATTAA 798 0.4436 MSGKEGIVSEQDVESQELHQFMNPQQQLNKPNTTTTTTTTNHCASSSGVDHRPRGRPAGSKNKPKMSAIITHDNSNAPSSHVLEITAGSEVLKSLFDFAHHKGKVICILDGKGVVEDVTLREATGRNLTLKGRFDILSIFGTIFPSQTSTNVGGLTIYLSGSTGQVIGGHVIHPFVALGTIKLTVVSFANIGSEKLCSTGYGREEHESSSLDVARHVAEGDGGFSNVGGSISGMRNMMSSNINHPSSSATIRLFGRDCTENLPPN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2181 265 Gene3D - 80 208 - -
Mal3g2181 265 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 189 IPR005175 -
Mal3g2181 265 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 246 IPR014476 GO:0003680
Mal3g2181 265 MobiDBLite consensus disorder prediction 21 47 - -
Mal3g2181 265 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 21 246 - -
Mal3g2181 265 ProSiteProfiles PPC domain profile profile. 75 214 IPR005175 -
Mal3g2181 265 MobiDBLite consensus disorder prediction 21 65 - -
Mal3g2181 265 CDD DUF296 81 188 IPR005175 -
Mal3g2181 265 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2181 Mal-Chr3 89248453 89249250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2181 51 190 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 45.714 5.73e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2181 - - cam:101492608 172.555