Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2180 ATGAGTAGGAAAGAAGGGATAGTGTCAGAACAAGATGTTGAGAGCCAAGAACTTCATCAATTCATGAACCCACAACAGCAACTAAATAATCCAAATACCACCACCACCACCAACCATCGTGCATCATCCTCTGGTGTAGCTCATCGTCCCCGAGGGCGTTCTGCTGGATCGAAGAACAAGCCCAAGATGCCTGCCATAATAACACATGACAACTTCAATATTCCCAGTTCACATGTGCTTGAGATCACTGCCGGATCTGAAGTGTTAAAGATTCTCTTTGATTATGCTCACTATAAAGGGAAGGTAATCTGCATCCTTGATGGAAAAGGAGTTGTGGAGGATGTAACGCTTCGTCAAGCCACAGGGAGAAATCTAACCCTAAAGGGAAGGTTTGATATTCTTTCGATTTCTGGGACAATTTTCCCATCGCAGACATCGACGAGTTTAGGAGGTTTGACAATTTACTTATCAGGAACTACAAGCCAAGTTATCGGGGGGCATGTGATCCACCCTTTGGTTGCCTTGGGTACAGTTAAGTTGACTGTTGTGTCCTTTGCAAATATTGGATCTGAAAAGTTCTGCTCATCTGGCTATGGTCAGGAAGAACATGAGTCATCAAGCCTCGATGTAGCTAGACACGTGGCTGAAGGTGATGGTGGTTTTTCCAATGTTGGAGGATCAATATCTGGAATCCATCCCTCATCCTCTGCTACGATTCGTCTATTTGGACGTGATTGTACTAAAAATTTGCCACCTAATTAA 762 0.4383 MSRKEGIVSEQDVESQELHQFMNPQQQLNNPNTTTTTNHRASSSGVAHRPRGRSAGSKNKPKMPAIITHDNFNIPSSHVLEITAGSEVLKILFDYAHYKGKVICILDGKGVVEDVTLRQATGRNLTLKGRFDILSISGTIFPSQTSTSLGGLTIYLSGTTSQVIGGHVIHPLVALGTVKLTVVSFANIGSEKFCSSGYGQEEHESSSLDVARHVAEGDGGFSNVGGSISGIHPSSSATIRLFGRDCTKNLPPN* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2180 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 203 IPR014476 GO:0003680
Mal3g2180 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 77 186 IPR005175 -
Mal3g2180 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 73 199 - -
Mal3g2180 253 CDD DUF296 78 185 IPR005175 -
Mal3g2180 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 22 203 - -
Mal3g2180 253 MobiDBLite consensus disorder prediction 13 44 - -
Mal3g2180 253 MobiDBLite consensus disorder prediction 1 64 - -
Mal3g2180 253 ProSiteProfiles PPC domain profile profile. 72 211 IPR005175 -
Mal3g2180 253 Gene3D - 77 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2180 Mal-Chr3 89198113 89198874 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2180 42 193 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 44.172 1.36e-36 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2180 - - cam:101492608 158.303