Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2177 ATGTTGTCTGAACAAGATCCTGAGAGAAGCCAGGAAATTCACCAATTCATGAACCTACAACAACAACAACTAAATACTCCAAGGAATGATACCACCACCAACAAAAACCATCGTGCATCATCCTCTGGTGTAGCTCCTCGTCCTCGAGGGCGTCCTCCTGGATCGAAGAACAAGCCCAAGATGCCTGCCATAATAACAAATGACAACTCCAATGCTGTCAGTTGTCATTTGCTCGAGATCGCTGCTGGATCTGAAGTATTAAAGAGTCTCTTTGATTATGCTCACCATAAAGGGAAGGTAATATGCGTCCTTAATGGAAATGGACTTGTGGAGGATGTCACGCTTCGTCAACCCACAGGGAGAAATCTAACCCTTAAGGGAAGGTTTGACATTCTTTCGATTTCTGGGACAATTTTCCCATCGCCGACATCGGCAAGTGTAGGAGGGTTATCAATTCACTTATCAGGAACTACTGGTCAAATTATCGGGGGGCATGTGATCCACCCTTTGGTGGCCTTGGGTTCAGTTAAGTTGACTGTATTGTCCCTTGCAAATATTGGATCTGAAAAGTTGTGTCCGGTTGCCTATGGCAGGGAAGAACATGAATCATCAGGCCTCGATGCAGCTACACACGTGGCTGAAGGTGATGGTTGTTTTTCCAATGTTGGAGGATCAACATCTGGAATGAACAACATGATGAGTAGTAACATCGACCATCCCTCATCCTCTACTAAGTTTCTTCTATTTGGACGTGAATATCCTTTAAATTTGCCACCTAGTCCTCCTCAATTCTAG 795 0.4453 MLSEQDPERSQEIHQFMNLQQQQLNTPRNDTTTNKNHRASSSGVAPRPRGRPPGSKNKPKMPAIITNDNSNAVSCHLLEIAAGSEVLKSLFDYAHHKGKVICVLNGNGLVEDVTLRQPTGRNLTLKGRFDILSISGTIFPSPTSASVGGLSIHLSGTTGQIIGGHVIHPLVALGSVKLTVLSLANIGSEKLCPVAYGREEHESSGLDAATHVAEGDGCFSNVGGSTSGMNNMMSSNIDHPSSSTKFLLFGREYPLNLPPSPPQF* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2177 264 PIRSF ESCAROLA 1 262 IPR014476 GO:0003680
Mal3g2177 264 ProSiteProfiles PPC domain profile profile. 70 204 IPR005175 -
Mal3g2177 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 18 231 - -
Mal3g2177 264 CDD DUF296 76 183 IPR005175 -
Mal3g2177 264 Gene3D - 74 207 - -
Mal3g2177 264 MobiDBLite consensus disorder prediction 12 41 - -
Mal3g2177 264 MobiDBLite consensus disorder prediction 1 65 - -
Mal3g2177 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 231 IPR014476 GO:0003680
Mal3g2177 264 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 184 IPR005175 -
Mal3g2177 264 SUPERFAMILY AF0104/ALDC/Ptd012-like 71 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2177 Mal-Chr3 89112842 89113636 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2177 40 191 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 46.626 2.46e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2177 - - cam:101492608 171.4