Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2175 ATGCATCCTTGGCTTGAAAGTATAGTCAATTTATGCAGGAACAGGAGGAATGACAACTTTGCTGCATTCAACGATGACCCTCTCGCGAGATCGATTAATCTCGAAAAGCATTTCTACGGAGAATTTTCCAGAGCTGTTGTTCAAGCCAATACAGATATGGAAGATCAAAGCCAAATTGAAGTTGCCTCTAAAAATGCACTCTTTCTTGGAGTTTACGACGGCCATGGTGGCGTCGAAGCCTCCCAATTCATATGTGATAACCTCTTCAACAATCTACTGAGGCTTGCTAATGAGAATGAAAATAATATAACTGAAGCTACTTTGAGGAATGCTGTTTCTGCTACTGAAGAGGGTTTTTTAGATTTTGTAAAAACTAATTCTATTGTAAAGCCAAATCTTGGAAATGTTGGTTCATATTCGTGTGCTGTAATTGGTACTATGGTTAATAAAAAAATCTGTGCTGAGCAGTTGACAAGAGATCACAATTGTAATGATCAAGATATTAGAGAAGAACTCAGGTCAAGGCATCTAGATGATCCTAACATTGTGATGGATAATAATGGATTGTTTCGTGTTAAAGGCATCGTTAAGGTTACTAGAACTATTGGTGATGCATATTTGAAGAGGCCTAAATTTACTTTGCGCGAATCGTTCCCCAAATTTAAAAAAGTGTCTGAACCTTTTACTAGAGTTTTAACAGATCGAGATAAGTTTCTTATATTTGCATCGGATGGACTTTGGCAGTTCTTGTCAAATGAACAAGCTGCTGATATTGTTCAAAAGAATCCAAGAAATGGAATTGCGAAAAGGCTTCTGAGTACTGCTCTAGCGGAAGCTGCTAAAAGAAGAAATCTTACCTATAGGAATATTCAGGCTTCTGTTACGGGGCGTGACAGTGTGAGCCGGAGGTCTTTTCATGATGATATAAGTGTGATTGTTGTGTTCTTGGACAAAATGTCGTTTCTGAGGAGGCGCGTGCTTAATTTGTCCTACAGAGGCTCTGCTGACACGCCGGTACCATCGGATTTTGCGCGGTCTGGATTAACCGCTTCAAGGCTGCAGTCATTGAGGCGTCAGAGTTTGAAGGATAGTAACAAGAACCGGTTTAAATCAGGTTCATTGCATGAATCTAGCTCTCAGGATCAGGGCCCTCAAAGTCCTCGGACTCCTTTGACTGAGAACCTTCAAACACTTGAGGCCGAGGGCTCTCAGACTCAGAAACTTTTGGGTCGGAGTTCTCGGGTTTAG 1248 0.4095 MHPWLESIVNLCRNRRNDNFAAFNDDPLARSINLEKHFYGEFSRAVVQANTDMEDQSQIEVASKNALFLGVYDGHGGVEASQFICDNLFNNLLRLANENENNITEATLRNAVSATEEGFLDFVKTNSIVKPNLGNVGSYSCAVIGTMVNKKICAEQLTRDHNCNDQDIREELRSRHLDDPNIVMDNNGLFRVKGIVKVTRTIGDAYLKRPKFTLRESFPKFKKVSEPFTRVLTDRDKFLIFASDGLWQFLSNEQAADIVQKNPRNGIAKRLLSTALAEAAKRRNLTYRNIQASVTGRDSVSRRSFHDDISVIVVFLDKMSFLRRRVLNLSYRGSADTPVPSDFARSGLTASRLQSLRRQSLKDSNKNRFKSGSLHESSSQDQGPQSPRTPLTENLQTLEAEGSQTQKLLGRSSRV* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2175 415 Gene3D - 28 321 IPR036457 -
Mal3g2175 415 Pfam Protein phosphatase 2C 62 283 IPR001932 -
Mal3g2175 415 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 14 324 - -
Mal3g2175 415 MobiDBLite consensus disorder prediction 354 415 - -
Mal3g2175 415 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Mal3g2175 415 SMART PP2C_4 35 314 IPR001932 -
Mal3g2175 415 CDD PP2Cc 53 316 IPR001932 -
Mal3g2175 415 ProSiteProfiles PPM-type phosphatase domain profile. 38 316 IPR001932 -
Mal3g2175 415 SUPERFAMILY PP2C-like 45 317 IPR036457 -
Mal3g2175 415 MobiDBLite consensus disorder prediction 371 415 - -
Mal3g2175 415 PANTHER ALPHABET, ISOFORM E-RELATED 14 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2175 Mal-Chr3 88874368 88876088 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2175 28 344 PP2C-type Phosphatase Gene Family AT5G06750 45.609 3.24e-93 284