Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2173 ATGCATCCTTGGCTTGAAAGTATAGTTAATTTATGCAGGAACAGGAGGAATGACAACTTTGCTGCATTCGACGATGACCCTCTCGCGAGATCGATTAATCTCGAAAGGCATTGCTATGGAGAATTTTCCAGGGCTGTTGTTCACGCCAATACAACTATGGAAGATCAAATTCAAATTGAAGTTGCCTCTAAAAATGCACTCTTTCTTGGAGTTTACGACGGTCATGGTGGCCCAAATCTTGGAAATGTTGGTTCATGCTGTCTTTCTGGAATTATATGGAAAGGGACGCTACATGTTGCGAATCTTGGAGATTCGCGTGCTGTAATTGGTACTATGGTTAATAAAAAAAATTGTGCTGAGCAGTTGACAAGAGATCACAATGGTAATGATCAAGATATTAGAGAAGAACTCAGGTCAAGGCATATACATGATCCTAACATTGTGATGGATAATAATGGGTTGTGCCGTGTTAAAGGCATCATTAAGGTTACTAGAAGTATTGGTGATGCATATTTAAAGAGGCCTAAATTTACTTTGCGCGAATCATTCCCCAAATTTAAAAAAACGGAACCAGAGATGCTTACTACAGTTTTAATAGATAGTTATAAGTTTCTTATATTTGCCTCTGGTGGACTTTGGGAGTTTTTGTCAAATGAAAAAGCTGCTGAAATTGTTCAAAAGAATTCAATAAATGGAATTGCAAAAAGGCTTCTGAGTACTGCTCTAGCGGAAGCTGCTAAAAGAAGAAATGTTACGTATAGGAACATTCAGGCTGCTGCTCCGGGACATGATAATGTGAGCCGGAGGTTTTTTCATAATGACATTAGTGTGATTGTTGTGTTTTTTGAACAAAACGTCATTTCTGAGGAGGCGCGCGTGCTTAATTTGTCCTACAAAGGCTCTTCTGACATGCATGTACCATCGGATTTTGCACAGTCTGGATTAACCGCTTCAAGGCTGCAGTCATTGAGGCATCGGAGTCCGAAGGATAGTATCAATAGCCGGTCTAAATCAGGTTCATTGCATGAATCTAGCTCTCAGGCTCAGAGACCTCAAAGTCCTCAGACTCCTCTGGCTCAGAACCTTCAAACCCTTGAGGCTGAGGGCTCTCAGACTCAGAGACTTTTGGATCCTTGTGAGAATATTTAA 1149 0.4064 MHPWLESIVNLCRNRRNDNFAAFDDDPLARSINLERHCYGEFSRAVVHANTTMEDQIQIEVASKNALFLGVYDGHGGPNLGNVGSCCLSGIIWKGTLHVANLGDSRAVIGTMVNKKNCAEQLTRDHNGNDQDIREELRSRHIHDPNIVMDNNGLCRVKGIIKVTRSIGDAYLKRPKFTLRESFPKFKKTEPEMLTTVLIDSYKFLIFASGGLWEFLSNEKAAEIVQKNSINGIAKRLLSTALAEAAKRRNVTYRNIQAAAPGHDNVSRRFFHNDISVIVVFFEQNVISEEARVLNLSYKGSSDMHVPSDFAQSGLTASRLQSLRHRSPKDSINSRSKSGSLHESSSQAQRPQSPQTPLAQNLQTLEAEGSQTQRLLDPCENI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2173 382 MobiDBLite consensus disorder prediction 333 382 - -
Mal3g2173 382 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 14 78 - -
Mal3g2173 382 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 78 291 - -
Mal3g2173 382 SUPERFAMILY PP2C-like 45 283 IPR036457 -
Mal3g2173 382 Gene3D - 81 293 IPR036457 -
Mal3g2173 382 Gene3D - 28 80 IPR036457 -
Mal3g2173 382 ProSiteProfiles PPM-type phosphatase domain profile. 1 282 IPR001932 -
Mal3g2173 382 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Mal3g2173 382 PANTHER ALPHABET, ISOFORM E-RELATED 14 78 - -
Mal3g2173 382 PANTHER ALPHABET, ISOFORM E-RELATED 78 291 - -
Mal3g2173 382 SMART PP2C_4 26 280 IPR001932 -
Mal3g2173 382 MobiDBLite consensus disorder prediction 318 382 - -
Mal3g2173 382 CDD PP2Cc 50 282 IPR001932 -
Mal3g2173 382 Pfam Protein phosphatase 2C 82 251 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2173 Mal-Chr3 88659260 88714314 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2173 28 311 PP2C-type Phosphatase Gene Family AT5G06750 42.330 1.27e-81 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2173 K01102 - psom:113309354 272.707