Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2170 ATGACGATTTCTATGGACTTGAATGCCTCTCCTTTGCCGGAGGAAGATGAAGATCCTTTTGAGGGCCAGGTCGAAGAGTATAATGCGCCAAAAAAGGACCAGGTCGAAGAGTATATTGCGCCAGAAGAGCACATAGAAAGTGGAGCTGATATAGCACGCCGGGAACGTGAAGAAAGAAAGAAACGGTTGAAAAGAGAACGTCCAGATGACAGGCCCGTGCAAGTATCACAGCCACCTGGATATGATAATTTTTTCCATAATAAGATCCTTAAATCATATGACAGAAGTAAGCTTCCTCCGGGTTGGTTGGATTGCCCTTCGTCTGGCCAGGAAATTTTTGGCATGATACCTTCTAAGGTTCCATTGGGTGAAACCTTCAATGACTATATTCTTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAAAGAGTTTTAGGAAGAAAACTTGGTCTGGTCATTGATCTGACGAATACTTCTCGATACTATCCAGTATCAGATCTAAAGAAAGAGGGTATCAAGCATGTTAAGATCCAATGTAAGGGCCGCGGTTCAGTACCTGATAATTCATCTGTTAATCATTTTGTGTACGAGGTTATACAATTTTTATCGCGTCAAAAACACTCGAAGAAGTATATACTTGTTCATTGTACACATGGTCATAATCGTACAGGATATATGATTGTCCATTATCTAATGCGCACAATGTCAATATCTGTTACTCAGGCGATAAAAATATTTTCTGATGCACGTCCTCCAGGAATCTATAAACCTGAGTATATTGATTCATTATATAAATTCTATCATGAAAAAAAGCCTGAAGTGATAGTCTGTCCTCCTACTCCGGAGTGGAAAAGGGCGCCCGAACTTGTTGATCTCAATGGTGAAGCAGCTCCAGATATTGATGACGATGATGATGATGGAGTACCAGGTCCTCCGTTGCAAGAGAACCATGAGATTGACACAATAATGACAAATGATGATGTTTTGGGAGATGAGATACCTAATGATCAGCAATATGCATTTCGGCAGTTCTGCTTTCAAATACTCAAATTGGGGGTTGGGGCCAGAGGACACATGCCATTTCCAGGGTCACACCCAGTTTCTTTAGACAGGGAAAATTTACAGCTGCTACGCCAGCGTTACTACTACGCAACATGGAAAGCTGATGGAACAAGATATATGATGCTAATAACTATGGATGGATGCTTCTTGATTGATAGAAACTTCAATTTTAGAAGGATTCAAATGAGGTTTCCATGCAGGGTTGGAAATGATGGTTTGGCGGAGAAGACTCACCACTTCACATTACTTGATGGGGAGATGATTATTGATACAGTGCCAGATTCAAAAAAGCAGGAAAGAAGATACCTAATATATGATCTGATGGCGGTCAACCTTGTTTCAGTGATAGAGCGGCCTTTCTGTGAACGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCCAGGAATCATGAACGGTACCATAGCAAACATCCGTACTATAGATATGATTTGGAACCTTTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCACAAAACTTTTGAACGAATTCATTCCGAAACTCTCACATGACGCAGATGGTCTCATATTTCAGGGATGGGACGATCCTTATGTACCTCGCACTCATGAAGGTCTCTTAAAGTGGAAATATGCTGATCTGAATTCAGTTGATTTTCTCTTTGAGATTGATGATGATCGTCAGCTTCTTTTTCTCTATGAACGTGGAAAAAAGAAACTCATGGAAGGGTTTATTGTTGCATTCGAAGATGGTTCAGACCCCGTGCTTTATTCCGGAAAGATCATCGAGTGTGCCTGGGATGGGGATAGAAATGAATGGATATTCAAGCGAGTCAGAACAGACAAGTCAACTCCCAATGACTTTAATACTTACAAGAAGGTGATGCGAAGTATAAGAGACAATATCACTGAGGATGTCCTGCTGACTGAAATAAACGAAATAATCCGCCTTCCCATGTATGCCGACAGGATAAGAAATGATAGCAAAGGACATCATGTAGCTAGGCGAAGGTAA 2073 0.4096 MTISMDLNASPLPEEDEDPFEGQVEEYNAPKKDQVEEYIAPEEHIESGADIARREREERKKRLKRERPDDRPVQVSQPPGYDNFFHNKILKSYDRSKLPPGWLDCPSSGQEIFGMIPSKVPLGETFNDYILPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRGSVPDNSSVNHFVYEVIQFLSRQKHSKKYILVHCTHGHNRTGYMIVHYLMRTMSISVTQAIKIFSDARPPGIYKPEYIDSLYKFYHEKKPEVIVCPPTPEWKRAPELVDLNGEAAPDIDDDDDDGVPGPPLQENHEIDTIMTNDDVLGDEIPNDQQYAFRQFCFQILKLGVGARGHMPFPGSHPVSLDRENLQLLRQRYYYATWKADGTRYMMLITMDGCFLIDRNFNFRRIQMRFPCRVGNDGLAEKTHHFTLLDGEMIIDTVPDSKKQERRYLIYDLMAVNLVSVIERPFCERWKMLEKEVIEPRNHERYHSKHPYYRYDLEPFRVRRKDFWLLSTVTKLLNEFIPKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYADLNSVDFLFEIDDDRQLLFLYERGKKKLMEGFIVAFEDGSDPVLYSGKIIECAWDGDRNEWIFKRVRTDKSTPNDFNTYKKVMRSIRDNITEDVLLTEINEIIRLPMYADRIRNDSKGHHVARRR* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2170 690 MobiDBLite consensus disorder prediction 298 312 - -
Mal3g2170 690 MobiDBLite consensus disorder prediction 24 72 - -
Mal3g2170 690 CDD Adenylation_mRNA_capping 364 564 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mal3g2170 690 PIRSF mRNA_capping_HCE 84 690 IPR017074 GO:0004484|GO:0006370|GO:0140818
Mal3g2170 690 SMART dsp_5 132 272 IPR020422 GO:0006470|GO:0008138
Mal3g2170 690 MobiDBLite consensus disorder prediction 297 319 - -
Mal3g2170 690 Pfam mRNA capping enzyme, catalytic domain 368 563 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mal3g2170 690 Gene3D Protein tyrosine phosphatase superfamily 79 291 IPR029021 -
Mal3g2170 690 PANTHER MRNA-CAPPING ENZYME 3 690 - -
Mal3g2170 690 SUPERFAMILY Nucleic acid-binding proteins 566 678 IPR012340 -
Mal3g2170 690 Pfam Dual specificity phosphatase, catalytic domain 150 270 IPR000340 GO:0008138|GO:0016311
Mal3g2170 690 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 97 286 IPR029021 -
Mal3g2170 690 ProSiteProfiles Dual specificity protein phosphatase domain profile. 120 276 IPR020422 GO:0006470|GO:0008138
Mal3g2170 690 ProSiteProfiles ATP-dependent DNA ligase family profile. 450 591 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Mal3g2170 690 Pfam mRNA capping enzyme, C-terminal domain 568 661 IPR013846 -
Mal3g2170 690 ProSitePatterns Tyrosine specific protein phosphatases active site. 217 227 IPR016130 GO:0016311|GO:0016791
Mal3g2170 690 MobiDBLite consensus disorder prediction 1 78 - -
Mal3g2170 690 CDD RNA_5'-triphosphatase 101 268 - -
Mal3g2170 690 Gene3D - 604 670 IPR012340 -
Mal3g2170 690 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 195 264 IPR000387 GO:0016311|GO:0016791
Mal3g2170 690 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 690 - -
Mal3g2170 690 Gene3D DNA ligase/mRNA capping enzyme 327 563 - -
Mal3g2170 690 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 329 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2170 Mal-Chr3 88559695 88572877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2170 1 690 Protein tyrosine phosphatase (PTP) family AT3G09100 67.194 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2170 K13917 - gmx:100803597 1205.28