Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2096 ATGGGTGGTGTTGCATGGACAGAAGAAGAAGATCACTTGCTTAAGAAGTGCATACAACAATATGGTGAAGGAAAGTGGCATCGGGTTCCTCTATTGGCTGGTCTAAACAGATGCCGCAAGAGTTGTAGGCTCAGATGGTTGAACTATCTCCGACCTAACATCAAGAGAGGAAATTTTGCTGAAGAGGAAGTGGAAATGATTGTCAAACTCCACAAATTATTAGGGAACAGGTGGTCCTTGATTGCAGGAAGGCTACCAGGTAGGACAGCAAATGATGTCAAAAACTATTGGAATTGTTATCTAAGTAAAAAACTAAATGCTCTAGAAGCTGATCAAGATAGATCACAATTGTCCAAAGATGTTGAAATCATTAGGCCACAACCAAGAAACATTGGTTCAAGCTCAGTGAAGAGAAGGAACCAAGGAGAGTCACCAACTGACCAAGTTCTAGCTCAACAAGAGAGTGGCATAACATTTGATGCTGATGGAAAGAACCATATGATTGAATCACAACAAGACATGATGATGTATTCATGCTTGGACCAACAAGGTATGGTTGGTGAGTTTCCAATGGATTTTCAATTAGAAGGATTTGAAGCTATGGTAAGTGGAGGAGAAGGTAGTACTAGCCAATGGAATTGGGAGGATATGCTCTTAGATATGGATCTGTATAATGATTTTTCTTAG 687 0.4017 MGGVAWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYLRPNIKRGNFAEEEVEMIVKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCYLSKKLNALEADQDRSQLSKDVEIIRPQPRNIGSSSVKRRNQGESPTDQVLAQQESGITFDADGKNHMIESQQDMMMYSCLDQQGMVGEFPMDFQLEGFEAMVSGGEGSTSQWNWEDMLLDMDLYNDFS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2096 228 MobiDBLite consensus disorder prediction 119 149 - -
Mal3g2096 228 PANTHER MYB TRANSCRIPTION FACTOR 5 226 - -
Mal3g2096 228 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 226 - -
Mal3g2096 228 MobiDBLite consensus disorder prediction 128 149 - -
Mal3g2096 228 SUPERFAMILY Homeodomain-like 5 97 IPR009057 -
Mal3g2096 228 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Mal3g2096 228 SMART sant 55 103 IPR001005 -
Mal3g2096 228 SMART sant 2 52 IPR001005 -
Mal3g2096 228 Gene3D - 58 124 - -
Mal3g2096 228 Gene3D - 4 55 - -
Mal3g2096 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Mal3g2096 228 ProSiteProfiles Myb-like domain profile. 6 50 IPR001005 -
Mal3g2096 228 CDD SANT 58 101 IPR001005 -
Mal3g2096 228 Pfam Myb-like DNA-binding domain 5 50 IPR001005 -
Mal3g2096 228 Pfam Myb-like DNA-binding domain 56 101 IPR001005 -
Mal3g2096 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Mal3g2096 228 CDD SANT 5 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2096 Mal-Chr3 86869345 86871474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2096 5 132 MYB Transcription Factor Family AT1G66370 60.145 4.86e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal3g2096 Myb_DNA-binding 9.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2096 K09422 - gmx:100798101 368.622