Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2017 ATGCAAAATGAATTTGTAAGATGCCTTTGGAAAGATAATAAAACTCAAAATAAATTTAACAAAAATATATTGCAACAGGACACTAGTAGAGAGTCAAGGAGACAGAAGAATGCTGCAAGTGGAGATGATTCAGAATCTGGAGCTGCAGGTCAAGGAGCAGGTGAAGCGAAAAGGGCTCTGTATCATTGCAATTACTGTAAAAAAGATATTACAGGAAAAATCCGTATAGTGTGCCGTGATAATTTGTCTTTTCCTCTCATTTGCCCAGACTGGAACACAGATGATGAAGTTTTGCTTCTAGAGGGAATTGAAATGTATGGCATGAATAACTCGGCGGAAGTTGCTGAGCATGTTGGAACAAAGAACAAAGAGGAATGCAGTGAACACTATAAGAATGTGTACTTGAATTCTCCATTCTTCCCTCTTCCGGACATGTCTCATGTTGTCGGGAAAAACAGAGAAGAACTTCTTGCCATGGCGAAAGGGCAGGGTGATGACAAGAAAGATTCTGCAATGGACAAAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGTCGGCCCTTCTTTGGTTGAAGCCAGTGGTTTTAACCCTAAAAGACAGGAGTTTGATCCTGAATATGATGATGATGCTGAGAAATTAATCGCCGATATGGAGTTTAACGATTCTGACACTGAGGATGAGCGAGAGCTCAAACTTCGTGTGCTGCGTATCTATAATAAAAGGCTTGATGAAAGAGAGCGCAGGAAGAAATTCATACTTGAAAGAAATTTGCTACATCCAAATCCGTTTGAGAAGGATTTAACACCCGAGGAAAAGACAATATGTCGGCAATATGACAGGCTAATGCGCTTTCATACTAAGGAAGAGCACGATGAATTGCTTAGAACCGTTATCTCTGAACACAGAACTCGGAAAAGAATTCAAGAGCTTAAGGAAGCCCGTGCTGCTGGTTGCCACAGTTCAGCTGAAGCAAATATCTATCTGGCAAACAAGAGAAGAAAGGAAGCTGAAGAAAGTGCTCATGTGGTCCCGAACAATCACGGAGACGTTGTTGGTACCAGCACTGCAAGGACAGCTACTTCAAGTTCTGTCTCTGGAGCAGATTTACTTTCTGAAGCTGAGAAACGTTTGTGTTGCGAGTTAAGGTTGCCTCCAACTGTGTATCTGAAGATGCAAGAGGAGCTGTCGGTGAAAATGATTGCTGGCAACGTCTCTTCAAAATCCGATGCTCATGGAATGTTCAAGATGGATACCATGATAATTGACAAGGTTTATGATATGCTCATTAAGAAGAGAATTGGTTCACCCTGA 1317 0.4131 MQNEFVRCLWKDNKTQNKFNKNILQQDTSRESRRQKNAASGDDSESGAAGQGAGEAKRALYHCNYCKKDITGKIRIVCRDNLSFPLICPDWNTDDEVLLLEGIEMYGMNNSAEVAEHVGTKNKEECSEHYKNVYLNSPFFPLPDMSHVVGKNREELLAMAKGQGDDKKDSAMDKDFGGNKPNSSRNVGPSLVEASGFNPKRQEFDPEYDDDAEKLIADMEFNDSDTEDERELKLRVLRIYNKRLDERERRKKFILERNLLHPNPFEKDLTPEEKTICRQYDRLMRFHTKEEHDELLRTVISEHRTRKRIQELKEARAAGCHSSAEANIYLANKRRKEAEESAHVVPNNHGDVVGTSTARTATSSSVSGADLLSEAEKRLCCELRLPPTVYLKMQEELSVKMIAGNVSSKSDAHGMFKMDTMIIDKVYDMLIKKRIGSP* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2017 438 SUPERFAMILY Homeodomain-like 347 434 IPR009057 -
Mal3g2017 438 MobiDBLite consensus disorder prediction 20 51 - -
Mal3g2017 438 MobiDBLite consensus disorder prediction 177 191 - -
Mal3g2017 438 CDD SANT 91 133 IPR001005 -
Mal3g2017 438 PIRSF Txn_adaptor_ADA2 48 81 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal3g2017 438 PIRSF Txn_adaptor_ADA2 77 365 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal3g2017 438 PIRSF Txn_adaptor_ADA2 347 438 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal3g2017 438 MobiDBLite consensus disorder prediction 162 204 - -
Mal3g2017 438 Pfam Myb-like DNA-binding domain 90 133 IPR001005 -
Mal3g2017 438 ProSiteProfiles SANT domain profile. 86 138 IPR017884 -
Mal3g2017 438 Gene3D - 354 436 IPR036388 -
Mal3g2017 438 Gene3D - 85 136 - -
Mal3g2017 438 SMART sant 87 136 IPR001005 -
Mal3g2017 438 SUPERFAMILY Homeodomain-like 84 137 IPR009057 -
Mal3g2017 438 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 19 78 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mal3g2017 438 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 80 437 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mal3g2017 438 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 19 78 - -
Mal3g2017 438 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 80 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2017 Mal-Chr3 82864293 82869842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2017 31 436 EF-hand Containing Proteins AT3G07740 37.500 2.29e-102 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g2017 Myb_DNA-binding 6.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2017 K11314 - cit:102617027 511.531