Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2016 ATGCAAAATGAATTTGTAAGATGCCTTTGGAAAGATAATAAAACTCAAAATAAATTTAACAAAAATATATTGCAACAGGACACTAGTAGAGAGTCAAGGAGACAGAAGAATGCTGCAAGTGGAGATGATTCAGAATCTGGAGCTGCAGGTCAAGGAGCAGGTGAAGCGAAAAGGGCTCTGTATCATTGCAATTACTGTAAAAAAGATATTACAGGAAAAATCCGTATAGTGTGCCGTGATAATTTGTCTTTTCCTCTCATTTGCCCAGACTGGAACACAGATGATGAAGTTTTGCTTCTAGAGGGAATTGAAATGTATGGCATGAATAACTCGGCGGAAGTTGCTGAGCATGTTGGAACAAAGAACAAAGAGGAATGCAGTGAACACTATAAGAATGTGTACTTGAATTCTCCATTCTTCCCTCTTCCGGACATGTCTCATGTTGTCGGGAAAAACAGAGAAGAACTTCTTGCCATGGCGAAAGGGCAGGGTGATGACAAGAAAGACATGTCTCATTTATCACTTCTTTTAGATAAATTTATATTGATATACTGGTCGGATTCTGGGACCTCAGTTAACACACATGCTGCAGCTAGTGCTAACCAAAAGCCAAATTCCTCAAGAAATGTCCCTTCTTTGGTTGAAGCCAGTGGTTTTAACCCTAAAAGACAGGAGTTTGATCCTGAATATGATGATGATGCTGAGAAATTAATCGCCGATATGGAGTTTAACGATTCTGACACTGAGGATGAGCGAGAGCTCAAACTTCGTGTGCTGCGTATCTATAATAAAAGGCTTGATGAAAGAGAGCGCAGGAAGAAATTCATACTTGAAAGAAATTTGCTACATCCAAATCCGTTTGAGAAGGATTTAACACCCGAGGAAAAGACAATATGTCGGCAATATGACAGGCTAATGCGCTTTCATACTAAGGAAGAGCACGATGAATTGCTTAGAACCGTTATCTCTGAACACAGAACTCGGAAAAGAATTCAAGAGCTTAAGGAAGCCCGTGCTGCTGGTTGCCACAGTTCAGCTGAAGCAAATATCTATCTGGCAAACAAGAGAAGAAAGGAAGCTGAAGAAAGTGCTCATGTGGTCCCGAACAATCACGGAGACGTTGTTGGTACCAGCACTGCAAGGACAGCTACTTCAAGTTCTGTCTCTGGAGCAGATTTACTTTCTGAAGCTGAGAAACGTTTGTGTTGCGAGTTAAGGTTGCCTCCAACTGTGTATCTGAAGATGCAAGAGGAGCTGTCGGTGAAAATGATTGCTGGCAACGTCTCTTCAAAATCCGATGCTCATGGAATGTTCAAGATGGATACCATGATAATTGACAAGGTTTATGATATGCTCATTAAGAAGAGAATTGGTTCACCCTGA 1383 0.41 MQNEFVRCLWKDNKTQNKFNKNILQQDTSRESRRQKNAASGDDSESGAAGQGAGEAKRALYHCNYCKKDITGKIRIVCRDNLSFPLICPDWNTDDEVLLLEGIEMYGMNNSAEVAEHVGTKNKEECSEHYKNVYLNSPFFPLPDMSHVVGKNREELLAMAKGQGDDKKDMSHLSLLLDKFILIYWSDSGTSVNTHAAASANQKPNSSRNVPSLVEASGFNPKRQEFDPEYDDDAEKLIADMEFNDSDTEDERELKLRVLRIYNKRLDERERRKKFILERNLLHPNPFEKDLTPEEKTICRQYDRLMRFHTKEEHDELLRTVISEHRTRKRIQELKEARAAGCHSSAEANIYLANKRRKEAEESAHVVPNNHGDVVGTSTARTATSSSVSGADLLSEAEKRLCCELRLPPTVYLKMQEELSVKMIAGNVSSKSDAHGMFKMDTMIIDKVYDMLIKKRIGSP* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2016 460 MobiDBLite consensus disorder prediction 20 51 - -
Mal3g2016 460 MobiDBLite consensus disorder prediction 196 214 - -
Mal3g2016 460 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 19 78 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mal3g2016 460 CDD SANT 91 133 IPR001005 -
Mal3g2016 460 SUPERFAMILY Homeodomain-like 84 137 IPR009057 -
Mal3g2016 460 MobiDBLite consensus disorder prediction 196 226 - -
Mal3g2016 460 Pfam Myb-like DNA-binding domain 90 133 IPR001005 -
Mal3g2016 460 ProSiteProfiles SANT domain profile. 86 138 IPR017884 -
Mal3g2016 460 PIRSF Txn_adaptor_ADA2 367 460 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal3g2016 460 PIRSF Txn_adaptor_ADA2 48 80 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal3g2016 460 PIRSF Txn_adaptor_ADA2 79 381 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal3g2016 460 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 19 78 - -
Mal3g2016 460 SUPERFAMILY Homeodomain-like 369 456 IPR009057 -
Mal3g2016 460 Gene3D - 85 136 - -
Mal3g2016 460 SMART sant 87 136 IPR001005 -
Mal3g2016 460 Gene3D - 376 458 IPR036388 -
Mal3g2016 460 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 80 459 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mal3g2016 460 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 80 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2016 Mal-Chr3 82829796 82835339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2016 25 458 EF-hand Containing Proteins AT3G07740 37.201 1.22e-102 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g2016 Myb_DNA-binding 7.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2016 K11314 - gmx:100811887 570.466