Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g2006 ATGTACCAAGCAATGTCTTTCAACCTTGTAGCAATGTTTTTTATATTTGTCACATTAGTAGCTAGTGAAGATAGCAATATTAGTTTCACATATAATGGTTTCAAATCATCACATTTGTATCTTGATGGTGTTGCTGAATTAACCTCAAATGGTTTACTTAGATTAACCAATGATACAAGACAACAAAAGGGTCATGCTTTTTATCCAAATCCAATAGTTTTCAACAATGGAAGTAGTAGTAGTAGTAGTAGTGTTAATAGTGTATCTTCTTTCTCTACTACTTTTGTTTTTGCTATAAAATCTGAGTTTCCTAATCTTAGTGGTCATGGAATTGTTTTTGTTCTTTCTCCAACAAAAGGGTTACCAAATTCACTACCAAGTCAATACCTTGGTCTATTCAATGAATCAAACAATGGAAACAACAATAACCGTGTTTTCGGCTTAGAACTTGATACAATTATGAATACAGAGTTTGATGATATCAATGACAACCATGTTGGAATTGATATCAATGGATTGAAATCAGAAAAATCAGCTTCAGCAGGTTATTATGATATTGATGGTAATGAGTTCAAGAATTTGAGCCTTTTTAGTGGCTTACCAATGCAAATTTGGTTGGAATATGATGGAGTTAAGAAAAAGATTGATGTTACTTTAGCTCCAATTAGTGTTGTTAAACCAAAACAACCTTTGTTATCATTGAACAAAGATCTTTCTTCAATTCTTAACAGTACTATGTATGTTGGATTTTCATCTTCAACAGGTTCAATTCTAACTTCTCATTATGTTCTTGGTTGGAGTTTTAAGGTTAATGGTCAAGCTCAAAACCTTGTGATCAATGAACTTCCCAAGTTACCTACTTTAGATGAAAAACATGATTCTAAGGTAATTTTGATTATTGGCTTGCCTTTGATTTCACTATGTTTGATTCTAATGGTAGCTATAGCAATATTTCATTTCATCAAAAGGAAGAAATTGTTTTCTGAGCTTCATGAAGATTGGGAGAAAGACTATGGAACTCAAAGATTCAAGTACAAAGATTTATACTTTGCAACAAAGGGTTTCAAGGAGAAGGAGCTATTAGGAACAGGTGGATTTGGTAGAGTCTACAAAGGTGTGATGCCAATTTCAAAACTTGAGGTAGCTGTGAAGAGAGTTTCACATGAATCAAGACAAGGGATGAAGGAATTCGTCGCGGAAATTGTTAGTATCGGTCGTCTTCGTCATAGGAATCTTGTTCCACTTCTCGGCTATTGCAGGCGAAAAAACGAGTTACTTTTAGTTTATGATTACATGCAAAATGGAAGTTTAGACAAATATTTACACAACAAAGAACAAAGATTTACCTTAAATTGGAGTCAAAGGTTTAGAATCATTAAAGGTGTTGCTTCTGGTTTGTTTTATTTACATGAAGAATGGGAACAAGTTGTGGTTCATAGAGATATTAAAGCTAGTAATGTTTTATTGGATGGTGAAATGAATGGTAGATTAGGTGATTTTGGTCTCTCAAGATTATATGATCATGGTACTGATCCTCAAACAACACATGTTGTTGGAACACTTGGTTATTTAGCACCAGAACATACAAGAACAGGTAAAGCTACAACAAGTTCTGATGTGTATTCATTTGGTGCTTTTTTGCTTGAAGTTGTTTGTGGTAAAAGACCTATTGAACAAGTAAGGGAATGTGAGAGTTTAATTTTGGTTGATTTTGTTTATGATTGTTGGAAAAGAGGTGAGATTATTGAGGCTAAAGATGTAAATTTAGGTGTGGATTATGTGGTTGAAGAAGTTGAATTGGTTTTGAAACTTGGTTTATTGTGTTCACATTGTGAGGCTTTGGCTAGACCAAGTATGAGACAAGTTTTGAGGTATTTGGAGAGGGATTTGGCACTTCCTGATTTGAGTTTTCTTAGTTTGTCTTCAATGGGATTAACTTCTGGACAATGTGAAAATTTTCAAGATTTTGGTATGTCTTATTCTTCTTCTATGGATAGACCATTCTCACATAATTCTTCAATTGCTGAATCACTTCTATCTGGTGGTCGTTGA 2052 0.3363 MYQAMSFNLVAMFFIFVTLVASEDSNISFTYNGFKSSHLYLDGVAELTSNGLLRLTNDTRQQKGHAFYPNPIVFNNGSSSSSSSVNSVSSFSTTFVFAIKSEFPNLSGHGIVFVLSPTKGLPNSLPSQYLGLFNESNNGNNNNRVFGLELDTIMNTEFDDINDNHVGIDINGLKSEKSASAGYYDIDGNEFKNLSLFSGLPMQIWLEYDGVKKKIDVTLAPISVVKPKQPLLSLNKDLSSILNSTMYVGFSSSTGSILTSHYVLGWSFKVNGQAQNLVINELPKLPTLDEKHDSKVILIIGLPLISLCLILMVAIAIFHFIKRKKLFSELHEDWEKDYGTQRFKYKDLYFATKGFKEKELLGTGGFGRVYKGVMPISKLEVAVKRVSHESRQGMKEFVAEIVSIGRLRHRNLVPLLGYCRRKNELLLVYDYMQNGSLDKYLHNKEQRFTLNWSQRFRIIKGVASGLFYLHEEWEQVVVHRDIKASNVLLDGEMNGRLGDFGLSRLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATTSSDVYSFGAFLLEVVCGKRPIEQVRECESLILVDFVYDCWKRGEIIEAKDVNLGVDYVVEEVELVLKLGLLCSHCEALARPSMRQVLRYLERDLALPDLSFLSLSSMGLTSGQCENFQDFGMSYSSSMDRPFSHNSSIAESLLSGGR* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g2006 683 SMART serkin_6 355 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2006 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Mal3g2006 683 Pfam Legume lectin domain 27 282 IPR001220 GO:0030246
Mal3g2006 683 CDD lectin_legume_LecRK_Arcelin_ConA 27 272 IPR001220 GO:0030246
Mal3g2006 683 CDD STKc_IRAK 361 628 - -
Mal3g2006 683 SUPERFAMILY Protein kinase-like (PK-like) 337 643 IPR011009 -
Mal3g2006 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 288 IPR013320 -
Mal3g2006 683 Gene3D Phosphorylase Kinase; domain 1 340 431 - -
Mal3g2006 683 Pfam Protein kinase domain 355 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g2006 683 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 8 678 - -
Mal3g2006 683 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Mal3g2006 683 Gene3D - 25 284 - -
Mal3g2006 683 Gene3D Transferase(Phosphotransferase) domain 1 432 632 - -
Mal3g2006 683 PANTHER - 8 678 - -
Mal3g2006 683 ProSiteProfiles Protein kinase domain profile. 355 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g2006 Mal-Chr3 82243221 82245272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g2006 22 683 Receptor kinase-like Gene Family AT2G37710 62.256 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mal3g2006 Pkinase 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g2006 - - gmx:100802293 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g2006 3 82243221 82245272 Mal2g2838 2 37578702 37580717 ECH
Mal3g2006 3 82243221 82245272 Mal3g2006 3 82243221 82245272 ECH