Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1989 ATGAGATGCACCATTCTCACAAACCCAATCCTCAAAATTCTTATTTTCTTCATCCTACAAACTTTACCACTCATAACACAAACAAAGATGCTAACTTTACCACTCAAATCACAAGTTATTCCATCTGGGTATCTTCCAAGACCACCAAACAAGCTTAGGTTTCATCACAACGTTAGTCTCACAGTTTCAATTACTATTGGCACCCCCCCACAAAATGTTTCCTTAGTCATTGATACAGGAAGTGAACTTTCATGGCTTCATTGCAACAACAACAAAACCAACCGGGTTTCATCTGACCCGATTTTTAACCCGAATATTTCTTCTTCATACAAACCTATTTCTTGTTCTTCATCTACATGCACGACCCGAACCCGAGATTTTCCTATACCTGCTTCATGTGACTCCAATAATCTCTGCCATGCAACTCTCTCATACGCAGATTTTTCTTCTTCTGAAGGGAACCTTGCTTCTGATGCATTCGGGTTTGGAGGATCCGATAACCCGGAAATTGTATTCGGGTGTATGAATTCCAGCATTAGCACAAACTCTGATGGAGATTTTAACACAACCGGGTTAATGGGTATGAATCTCGGGTCACTTTCTTTTGTTTCTCAGCTCAAGATACCCAAATTCTCCTATTGTATATCGGGTTATGATTTCTCGGGTATTTTACTTCTCGGGGAATCCAATTTCTCGTGGGTCGGGTCATTGAACTATACTCCTTTGGTTCAAATATCCACTCCTTTGCCCTCTTTTGATCGGGCGGCATATACTGTTCGGCTTATGGGAATTAGGGTTTCGAAGAAGTTACTTAATTTATCTAATGATGTGCTCGCTCCGGATCATACTGGAGCAGGTCAAACTATGTTTGATTTGGGCACTCAGTTTACGTTTTTACTTGGGCCAGTTTATAGTGTGTTGCGAGAAGAGTTTCTTAATCAAACTAATAGTACTTTACGGGTAATGGATGATCCAAATTTCGCGTTTCAAGTTGGAATGGATCTTTGTTATCGGGTTCCATTGAACCAATCGAAATTACCCGAGTTGCCAGGTGTTAGTTTAATATTCGATGGAGCCGAGATGAGGGTTTCGGGCGAACAACTTTTATATCGGATTCCGGATCGGGTTGTAGGGAATGATTCAGTGTATTGCTTCACATTTGGGAACTCGGATCTACTAGGTGTAGAGTCATTTATCATTGGGCATCACCAACAACAGAATATGTGGATGGAATTTGATCTTGTGAAATCTAGGGTTGGTTTGGCTCACGTACGATGTGATTTGGTGGGTCAAAAAGTATTGGGCTTTGTGTAG 1314 0.4102 MRCTILTNPILKILIFFILQTLPLITQTKMLTLPLKSQVIPSGYLPRPPNKLRFHHNVSLTVSITIGTPPQNVSLVIDTGSELSWLHCNNNKTNRVSSDPIFNPNISSSYKPISCSSSTCTTRTRDFPIPASCDSNNLCHATLSYADFSSSEGNLASDAFGFGGSDNPEIVFGCMNSSISTNSDGDFNTTGLMGMNLGSLSFVSQLKIPKFSYCISGYDFSGILLLGESNFSWVGSLNYTPLVQISTPLPSFDRAAYTVRLMGIRVSKKLLNLSNDVLAPDHTGAGQTMFDLGTQFTFLLGPVYSVLREEFLNQTNSTLRVMDDPNFAFQVGMDLCYRVPLNQSKLPELPGVSLIFDGAEMRVSGEQLLYRIPDRVVGNDSVYCFTFGNSDLLGVESFIIGHHQQQNMWMEFDLVKSRVGLAHVRCDLVGQKVLGFV* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1989 437 Pfam Xylanase inhibitor C-terminal 256 421 IPR032799 -
Mal3g1989 437 Gene3D Acid Proteases 230 429 IPR021109 -
Mal3g1989 437 ProSiteProfiles Peptidase family A1 domain profile. 60 422 IPR033121 -
Mal3g1989 437 Pfam Xylanase inhibitor N-terminal 62 227 IPR032861 -
Mal3g1989 437 Gene3D Acid Proteases 53 228 IPR021109 -
Mal3g1989 437 PANTHER ASPARTYL PROTEASE-RELATED 21 433 IPR001461 GO:0004190|GO:0006508
Mal3g1989 437 PANTHER ASPARTIC PROTEINASE PCS1 21 433 - -
Mal3g1989 437 SUPERFAMILY Acid proteases 61 427 IPR021109 -
Mal3g1989 437 CDD pepsin_A_like_plant 61 426 IPR034161 -
Mal3g1989 437 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 75 86 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1989 Mal-Chr3 81893618 81894931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1989 31 427 Miscellaneous Gene Families AT1G44130 23.206 3.16e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1989 - - gmx:100813686 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1989 3 81893618 81894931 Mal3g1989 3 81893618 81894931 ECH
Mal3g1989 3 81893618 81894931 Mal4g0527 4 5056591 5057673 ECH
Mal3g1989 3 81893618 81894931 Mal7g2304 7 81115846 81116943 ECH