Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1983 ATGATTGAGTCATCCATGTCAAAGACAATGATGATGGATAAAGTAATGACTTATAATTGGTCAGAAGATGATGAACTTTTAAGAGAGCTTTTAGTTGATGAGTCTCCCCTTCTTATGTTGCCACAAGAGAGAGTAACTGAAGTAACCAACTTAAGTCATGATTCTTCAAAAGACCAACCTTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACAATAGTAACCACTTTCAACAAATTTCATCAACAAGAGTTTCTATATTAGAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGTATGGACAAAAATCCATCAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGTGCTAAGAAGCAGGTTGAGAGATCCATTGAGGACCCTGACACTCTCATAATCACTTATGAAGGACTCCACTTACACTTTGCTTATCCTTATTTCATAGTGGGCCAATCACATCAATCTCATTCTCATCCACCAATCAAGAAGTCCAAGCCTACCTCTTCACAAGGCCCAACCCAAGACTATAAAGCAAATGAAGTTCATCAAGGTCAGAATGTACAAGAAGCCCATGAAGCCCAATCTAGTACTTCTTTGGGACTCATTTCACCCACTTTATTGGACTTTACACAAGATACAGCCCAAGAAAATTTGAGCTCACAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTAGAAACCCTACAAACAATGTTGATAGTGATGATTAG 852 0.3756 MIESSMSKTMMMDKVMTYNWSEDDELLRELLVDESPLLMLPQERVTEVTNLSHDSSKDQPFNRFISNIYSGPTISDIENALLVTNNSNHFQQISSTRVSILERSLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSIEDPDTLIITYEGLHLHFAYPYFIVGQSHQSHSHPPIKKSKPTSSQGPTQDYKANEVHQGQNVQEAHEAQSSTSLGLISPTLLDFTQDTAQENLSSQGLLEDMVPFMVRNPTNNVDSDD* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1983 283 SMART WRKY_cls 124 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g1983 283 Pfam WRKY DNA -binding domain 125 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g1983 283 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 20 279 - -
Mal3g1983 283 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 279 IPR044810 GO:0003700
Mal3g1983 283 Gene3D WRKY domain 120 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g1983 283 ProSiteProfiles WRKY domain profile. 119 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g1983 283 SUPERFAMILY WRKY DNA-binding domain 122 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g1983 283 MobiDBLite consensus disorder prediction 194 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1983 Mal-Chr3 81695202 81697966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1983 18 276 WRKY Transcription Factor Family AT5G43290 43.066 3.99e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g1983 WRKY 3.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1983 - - gmx:100810459 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1983 3 81695202 81697966 Mal3g1983 3 81695202 81697966 ECH