Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1980 ATGGATTCACAATTTAAAGGGTTTTTTGGTTCCACAAATGAGATCCAATTGAGGAATCAATCTTTACCTGTTCTTCAGAATCAGGGATTTGAAAATGGCTTTATTGATCAAAGTAGAGAATTTGGTTCTAATATGGTACCAGCTGATTATACACCTTCATCAACAAGGACCTCGATTTCGACACATGAGGAGCCTTCTCCTGAGGACTGTGAATTTTCTGATGCTGTTTTGAGTTACATCAATAACATCCTTATGGAAGAAGATATGGAAGATAAAACATGTATGCTTCAAGATTCTTTAGATCTTCAAATTGCTGAGAAATCGTTTTATGAAGTTATAGGCGAAAAGTACCCGGTTTCGCCATTAGAAAAACCTCAAAGTCTTGGTAGTGAAACTGATGGTTTTGGAGATAATTACTTTTTTGATAATCATGGTACTTGTGTTGGTGATGGTGATCTTAGTAGCATTTTTACCAACAATTCTTTGCGCGGAAACTCGAGGGAAGTTCAATTTCCTCATCAAGATTTTCCAGTAAATAGCATTTCCCAAACATCTTATAGCTCTACAAATAGTGTAAAAAGTACTGTGGAAGGTCCTCTGGATTCTCCGGATAGTATTTTACAGGTGTCTGATCAGAATAGCGAGAGTCAACTGATTTTGCAATTTCAAAGGGGTGTTGAGGAGGCTAATAAGTTTCTCCCTAATGGAAATGGCCTCTTTCGTAATTTTGATGCTCCTAAGTTTTCGATACTAGAGCCTAAAGTGATGAAAGATGAATTATCGGTTAAGGTCGAGAAGGATCAGAGGGAGTCTTTTCTTTTTGGATCAAAGGGAAGGAAGCATCCGCACGGTGGAGAAGAAGACATTGAAGAAAATAGAAGCAGCAAGCAAGCAGCGATTTACTCAGAACCTTTGTTGCGGTCAACTATGATGGATACGTTCCTGCTTCATAGTTTAGGAGATGGTAAGACGCATTTTACGGCTCGTCGTGAGGCGTTACAAATAAAAAACAAGATGATAATGCTGCCAAGTAATAAATCGAAAGCTCCAACTGGTGGGAAAGGACGAGGTAAAAAACAAAATGGGAAAAAAGAAGTGATTGATTTGAGAACACTGCTTGTTCTTTGTGCTCAAGCTGTGGCAGCAGATGACAATAAAAGTGCACATGAGTTGCTAAAGCAGATCAGACAGCACTCCAACCCTTTTGGAGATGGAAATCAGCGGTTGGCTTATATATTTGCCGATGGCCTTGAGGCACGTTTGGCTGGTACAGGAAGCCAAATTTATAAAGGACTAATCAGTAAAAGAACATCTGCTGCTGATTTTCTGAAAGCTTATCATCTATACCTTGCAGCTTGCCCTTTCCGGAAGATGACTAGTTTTGTCTCGAATGTCACTATAATGAAATCTGTCGCAAGTTCAATGAGGGTCCATGTTGTTGACTTCGGTATCCTCTATGGTTTCCAATGGCCTACTTTTATACAAAGACTTGCATTACTACCAGGAGGACCGCCGAAACTTCGGATTACAGGAATAGACATTCCACAACCTGGTTTCAGGCCTGCAGAGAGAATTATAGAAACTGGTTCGCGCTTGGCAGCATATGCTAAATCTTTTAATGTTCCATTTGAGTATAATGCCATAGCAAAAAAATGGGAAACCATTCAGCTTGAGGAACTCAAAATCGAAAAAGATGAATACCTTGTTGTTACCTGTTTTTACCGTGGTAAAAACTTGCTGGATGAATCTGTGGTAGTCGACAGTCCAAGGAATAAAGTCCTTAGTTTGATAAGGAGGATCAAACCTGATATATTCCTTCACGGCATTGTTAATGGTGCCTTTAATGCACCTTTCTTTGTTACTCGATTTAGAGAGGCGCTGTTTCACTTCTCTTCACTTTTCGATATGCTTGAAAGTATCGTGCCTCGTGAGGATTGGGAAAGGATGCTAATTGAGAAAGAGATATTTGGGAAGGAAGCATTAAATGTCATAGCTTGTGAAGGTTGTGAGAGAGTAGAGAGGCCAGAGACATATAGGCAGTGGCAAATTCGAATTCTTCGAGCCGGGTTTTCGCAACAGGCTTTTGCGAAAAGCACAGTTGAAAGAGCAGTGGAGAAAGTAAGGTCTAGCTACCACAAGGATTTTGTAATTGACGAAGATAGCAAGTGGTTATTGCAAGGTTGGAAAGGAAGAATCGTTTACGCGTTTTCTTGTTGGAAACCTGCTTGA 2229 0.3997 MDSQFKGFFGSTNEIQLRNQSLPVLQNQGFENGFIDQSREFGSNMVPADYTPSSTRTSISTHEEPSPEDCEFSDAVLSYINNILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPVSPLEKPQSLGSETDGFGDNYFFDNHGTCVGDGDLSSIFTNNSLRGNSREVQFPHQDFPVNSISQTSYSSTNSVKSTVEGPLDSPDSILQVSDQNSESQLILQFQRGVEEANKFLPNGNGLFRNFDAPKFSILEPKVMKDELSVKVEKDQRESFLFGSKGRKHPHGGEEDIEENRSSKQAAIYSEPLLRSTMMDTFLLHSLGDGKTHFTARREALQIKNKMIMLPSNKSKAPTGGKGRGKKQNGKKEVIDLRTLLVLCAQAVAADDNKSAHELLKQIRQHSNPFGDGNQRLAYIFADGLEARLAGTGSQIYKGLISKRTSAADFLKAYHLYLAACPFRKMTSFVSNVTIMKSVASSMRVHVVDFGILYGFQWPTFIQRLALLPGGPPKLRITGIDIPQPGFRPAERIIETGSRLAAYAKSFNVPFEYNAIAKKWETIQLEELKIEKDEYLVVTCFYRGKNLLDESVVVDSPRNKVLSLIRRIKPDIFLHGIVNGAFNAPFFVTRFREALFHFSSLFDMLESIVPREDWERMLIEKEIFGKEALNVIACEGCERVERPETYRQWQIRILRAGFSQQAFAKSTVERAVEKVRSSYHKDFVIDEDSKWLLQGWKGRIVYAFSCWKPA* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1980 742 MobiDBLite consensus disorder prediction 48 69 - -
Mal3g1980 742 MobiDBLite consensus disorder prediction 273 295 - -
Mal3g1980 742 ProSiteProfiles GRAS family profile. 360 740 IPR005202 -
Mal3g1980 742 MobiDBLite consensus disorder prediction 273 294 - -
Mal3g1980 742 Pfam GRAS domain family 369 740 IPR005202 -
Mal3g1980 742 MobiDBLite consensus disorder prediction 180 205 - -
Mal3g1980 742 PANTHER SCARECROW-LIKE PROTEIN 9 42 741 - -
Mal3g1980 742 MobiDBLite consensus disorder prediction 180 198 - -
Mal3g1980 742 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 741 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1980 Mal-Chr3 81640926 81643154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1980 68 741 GRAS Transcription Factor Family AT2G37650 52.746 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal3g1980 GRAS 1.4e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1980 - - ccaj:109816616 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1980 3 81640926 81643154 Mal3g1980 3 81640926 81643154 ECH