Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1938 ATGGGTGCTTGCTGGAGCAATAGGGTTAAGTCTGTGAGTCCTTCAAACACAGGGTTCACTTCTAGAAGTGTAAGCAGAAGTGGCCATGATATCAGCTCAACTAGCAGGAACTCATCAGCCTCTATATCTGTTACTTCTCGAAGTGAGGGTGAAATCTTGCAATCTTCGAACTTGAAAAGCTTCAGCTACAATGAGGTAAGAGCAGCCACGAGAAATTTCCGGCCGGACAGTGTCTTAGGAGAGGGTGGTTTTGGTTCAGTTTTTAAAGGATGGATTGATGAGCATTCACATGCTGCAACCAAACCAGGAATGGGTATTATTGTTGCTGTAAAGAGGCTTAACCAAGAGGGGCATCAGGGTCACAGAGAATGGTTGGCTGAAATCAACTATCTCGGGCAACTTCAGCATCCTAATCTTGTCAAATTGATAGGATACTGCTTTGAGGATGAACATCGGCTCCTGGTTTATGAGTTTATGCCAAAGGGAAGCATGGAAAATCATCTTTTTAGACGAGGTTCTTATTTTCAACCATTCTCTTGGAGTTTGCGAATGAAAATTGCCCTCGGAGCTGCAAAAGGTCTTGCTTTTCTCCATAGTACAGAACCTAAAGTCATATACCGTGACTTCAAAACATCGAATATACTGCTTGATTCTAACTATGATGCCAAACTTTCTGATTTTGGGTTGGCTAGAGATGGACCAACTGGTGATAAAAGTCATGTCTCTACTCGGGTTATGGGAACCCGTGGATATGCAGCACCGGAGTATCTAGCAACAGGACATCTTACTGCCAAGAGTGATGTATATAGTTTTGGAGTCGTTCTTCTAGAAATTATATCAGGAAGACGAGCCATAGACAAGAACCTGCCAGCCGGAGAACACAACCTAGTCGAATGGGCCAAGCCTTATCTATCCAACAAACGACGAGTTTTCCGTGTGATGGATCCACGGCTCGAAGGTCAATATTCACATAGCCGAGCTCATGCTGCAGCCGCCCTTGCTTCGCAATGTCTTTCTGTAGAGCCTAGGATCAGGCCAAACATGGACGAGGTTGTGAAAACATTGGAACAGCTTCAGGAACCAAAGGATGCACAGAAGAAAGGTTCTGATCACCGCGCGCGCAATTCCAGCCTCGGCCACAATGGCAAAGGTAATGCAGATGCTACTAGAAAGGCTTCTGCTTATCCTAGACCGTCTGCTTCTCTCCTTCATGCTTGA 1218 0.4524 MGACWSNRVKSVSPSNTGFTSRSVSRSGHDISSTSRNSSASISVTSRSEGEILQSSNLKSFSYNEVRAATRNFRPDSVLGEGGFGSVFKGWIDEHSHAATKPGMGIIVAVKRLNQEGHQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDSNYDAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEIISGRRAIDKNLPAGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSHSRAHAAAALASQCLSVEPRIRPNMDEVVKTLEQLQEPKDAQKKGSDHRARNSSLGHNGKGNADATRKASAYPRPSASLLHA* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1938 405 MobiDBLite consensus disorder prediction 8 46 - -
Mal3g1938 405 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Mal3g1938 405 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Mal3g1938 405 Pfam Protein tyrosine and serine/threonine kinase 77 355 IPR001245 GO:0004672|GO:0006468
Mal3g1938 405 SUPERFAMILY Protein kinase-like (PK-like) 40 355 IPR011009 -
Mal3g1938 405 MobiDBLite consensus disorder prediction 1 46 - -
Mal3g1938 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mal3g1938 405 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1938 405 MobiDBLite consensus disorder prediction 359 405 - -
Mal3g1938 405 PANTHER KINASE 1B 22 390 - -
Mal3g1938 405 CDD STKc_IRAK 79 358 - -
Mal3g1938 405 Gene3D Transferase(Phosphotransferase) domain 1 159 381 - -
Mal3g1938 405 PANTHER OS01G0588500 PROTEIN-RELATED 22 390 - -
Mal3g1938 405 MobiDBLite consensus disorder prediction 359 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1938 Mal-Chr3 80356532 80359720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1938 27 355 Glycoside Hydrolase AT3G07070 47.447 1.72e-105 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mal3g1938 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1938 - - gmx:100793817 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1938 3 80356532 80359720 Mal3g1938 3 80356532 80359720 ECH