Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1931 ATGGCGGAATTTGAATCAGAGTTGTGTTGTTTGGAGAATAAGGAATCAACGGTTGCTTCTTGCTCATCTGTGTCTGAAGGTAGTGACAGTGCAATTCAAAAGTCTTCAGGGATATGTAGTCCCACGGCTACATCGACATCGCCCTCACATCGGAGGACAACGGGTCCTATAAGGCGTGCTAAGGGTGGTTGGACAGCAGAGGAGGATGAGACATTAAGAAATGCTGTGGCAGCTTTTAAGGGAAAACATTGGAAGAAAATAGCTGAGTTTTTCACTGATAGATCAGAAGTTCAATGTCTGCACCGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCATGGACACAGGAGGAGGATGATAAAATTGTTGAACTGGTGTCAAAATACGGGCCTACAAAATGGTCCTTGATTGCCAAATCGTTGCCTGGTCGAATAGGGAAACAGTGTCGAGAAAGGTGGCATAATCATCTTAATCCTGAAATAAAGAAGGATGCCTGGACTTTGGAGGAGGAACTAGCCTTGATGAATGCTCATCGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTTCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAAAAGAAGTTAGATTTTTACTTAGCCACAGGAAAACTTCCACCAATTCCAAAAAATAATCCAATAGTTGCTGCCAAAGACACAATTAAACGTTCTGCTACTAAAACAATACTTGTTTCATCTAATAGAGAATTAAATGTAGCTATCGAAGCATCGTCTGAAACTACAGCCATTAGTAAGCCAGATGACAGTGGCAAGAATCAGTTTGAATCCTCAGGAACAGCTAGAGAAGTTGGTGATTCTTCAAGTGTCCCGGCAAATGAATCTGCTGATTCTGACTGTGTAGAAGGCAAGCCTGGACCATCCAATGTTGATCTTAGCTGTGGAAACTCCGAACATATATCAAGAGCTAATTTTGGAACAACTTATGGCCCAAAATCTGAGAATTCTGTACTCAATGGAAACTCAATAACTGAGCATTGTTTAAACAATGGTAAAATGAGCAATAGCAGTAGCGGGTTAATCAGGACATCCACACAAGAAAATCAGACTTGTGGTTCTTTGTGTTACGAGCCACCACTTTTAGCTGGTTCAGTTCCTTTAGATTCTCTTCATTTAAGTATTCTCTGCATGCAGAGTGATTACTGTTCTAAGTTGTCACCCATGGGTTACATCACTCCACCTCGCACGAGGGTTAGTGAATTATGTACGGAGACCCCTGAATCAATATTGAGAAAGGCTGCTAATACCTATCCAAATACTCCTTCCATATATAGGCGGAGAAGAACTGGAGTCCAACCACTCACTTCTCCTAGTAAAGTTTTAAAAGTCGACAATGATTCACATGCTTCTAATGAACCATATAGAACCAAGAATAATTCTGGTCCTGAAGCTCAGACGTTACCTGAGAGTCCCTCAAGCCATGGCAATAAGAGTGTTGTTCTCAATAATAAGTCATTCAATGCATCTCCACCGTACCGGTTAAGAACCAAACGAACAGCAGTTGTCAAGTCTGTGGAGAAACAACTTGAGTTTGCATTTGACAAAGAGAAGAATGATGACAATATGAATGCAATGGAAAAATCTACAAAGAGGAGCAATGTTATGACTGAGGATTGTCTGCATGAAAGAAAATTGGTAGCGACGTAG 1719 0.4095 MAEFESELCCLENKESTVASCSSVSEGSDSAIQKSSGICSPTATSTSPSHRRTTGPIRRAKGGWTAEEDETLRNAVAAFKGKHWKKIAEFFTDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPEIKKDAWTLEEELALMNAHRIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLATGKLPPIPKNNPIVAAKDTIKRSATKTILVSSNRELNVAIEASSETTAISKPDDSGKNQFESSGTAREVGDSSSVPANESADSDCVEGKPGPSNVDLSCGNSEHISRANFGTTYGPKSENSVLNGNSITEHCLNNGKMSNSSSGLIRTSTQENQTCGSLCYEPPLLAGSVPLDSLHLSILCMQSDYCSKLSPMGYITPPRTRVSELCTETPESILRKAANTYPNTPSIYRRRRTGVQPLTSPSKVLKVDNDSHASNEPYRTKNNSGPEAQTLPESPSSHGNKSVVLNNKSFNASPPYRLRTKRTAVVKSVEKQLEFAFDKEKNDDNMNAMEKSTKRSNVMTEDCLHERKLVAT* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1931 572 ProSiteProfiles Myb-like domain profile. 108 159 IPR001005 -
Mal3g1931 572 Gene3D - 166 230 - -
Mal3g1931 572 PANTHER MYB-RELATED PROTEIN B-LIKE 27 483 - -
Mal3g1931 572 PANTHER MYB PROTEIN-RELATED 27 483 - -
Mal3g1931 572 SUPERFAMILY Homeodomain-like 110 206 IPR009057 -
Mal3g1931 572 SMART sant 164 212 IPR001005 -
Mal3g1931 572 SMART sant 112 161 IPR001005 -
Mal3g1931 572 SMART sant 60 109 IPR001005 -
Mal3g1931 572 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 107 IPR017930 -
Mal3g1931 572 MobiDBLite consensus disorder prediction 440 468 - -
Mal3g1931 572 ProSiteProfiles Myb-like domain profile. 160 210 IPR001005 -
Mal3g1931 572 MobiDBLite consensus disorder prediction 264 319 - -
Mal3g1931 572 MobiDBLite consensus disorder prediction 27 57 - -
Mal3g1931 572 MobiDBLite consensus disorder prediction 264 299 - -
Mal3g1931 572 MobiDBLite consensus disorder prediction 27 53 - -
Mal3g1931 572 CDD SANT 64 107 IPR001005 -
Mal3g1931 572 Gene3D - 60 112 - -
Mal3g1931 572 SUPERFAMILY Homeodomain-like 62 117 IPR009057 -
Mal3g1931 572 CDD SANT 167 210 IPR001005 -
Mal3g1931 572 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 164 214 IPR017930 -
Mal3g1931 572 MobiDBLite consensus disorder prediction 440 510 - -
Mal3g1931 572 Gene3D - 113 164 - -
Mal3g1931 572 ProSiteProfiles Myb-like domain profile. 56 107 IPR001005 -
Mal3g1931 572 MobiDBLite consensus disorder prediction 476 510 - -
Mal3g1931 572 CDD SANT 115 159 IPR001005 -
Mal3g1931 572 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 163 IPR017930 -
Mal3g1931 572 Pfam Myb-like DNA-binding domain 165 208 IPR001005 -
Mal3g1931 572 Pfam Myb-like DNA-binding domain 113 159 IPR001005 -
Mal3g1931 572 Pfam Myb-like DNA-binding domain 61 107 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1931 Mal-Chr3 80216114 80220755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1931 51 545 MYB Transcription Factor Family AT5G02320 49.225 6.82e-140 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal3g1931 Myb_DNA-binding 7.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1931 K09422 - gmx:100793280 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1931 3 80216114 80220755 Mal3g1931 3 80216114 80220755 ECH