Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1917 ATGGGCAACCGAATCAGCAATCTCTGCATCTGTTCCGCCGGCACCGGAGATATCTCCGGCAGGTTGCAAAACACCTTTACCTTGTTGTCCAAGAAACATGAAAAAGCTATTTGCAACTCCATCAGCTATGTCAGACCAAACCCACCTCGAATCTCCGGCAACACATTCTCCGAAGATGATTCCGCCCTCATGACTTTCCGGTCAGTTGCCGGAGCCACCGTGAGTGCTAACTCTTCATCAACACCTTCCATTTCCCTTGATGACTCTCTTCAACATAGCACTGTTTTGGATTCCTCTGCTTCTTTTGAAAGCTTTGGTTCCTTTACTTCCACAATGATGCATCCTCAATATCAAAATCAGCATGATCCTCGTAGCTCTTCTGTGTGTACCTCCATTGACGAAGGGTTATCTTCGAGTCCTTTCAATCGTGTGTTTAATGCTAATTTCATTGAGAAATATTCAGAAGAAGTGAAGTTGAACAAGCCTAATAAGATCAGCTTGAAGAAGGTTCTTAGTAGAGTTTTTTCCAATGCAGTATCTTTTGGAAAAGGTTCAATTTTTAAGAAAAGTGATAATGTTAATGCTAATGCAAATGCAAATGCAAGAGTGAGTTGTAGTACTAGTACTAGTTTGAGTGATGAATTGAGATTGCATGATAATAACTATTTGGATGATGATGATGATGGATGTGGATGTGATGATATGTTAATGGTGTGTGAGAATCTTCATATGGCTCAAGGAAAAGGCGGTGAGGATCGTATGCATATTGTGATTTGCGAGGATCATGGATGGGTTTATGTTGGGATTTATGACGGATTTAATGGTCCTGATGCTACTGATTATCTTCTTCATAATATGTTTTATGCTGTTCATGATGAGCTTAAAAGGCTTTTATGCAATCAAAGTAGTAATACTAAAGAAGTGAAAAGTGAAAGTTTTAGTCACTCGGATGTGTTGGAAGCTCTTTCTGAGGCAATGAGGAAAACTGAGGATGCATTTTTGAAGATAATTGATGAGATGATTAATCATAATCCTGTTTTAGCTATGATGGGATCTTGTGTTTTGGTTATGTTGATGAAAGGTGAAGATGTTTATTTGATGAATGTTGGTGATAGTCGAGCTGTTTTGGCGACTCGGATTGGGAATCCCCTTCAACTCACCATGGATCATAGCACTCATGTGAAAGAGGAGCTTTATAGAATCAGACAGGAGCATCCAGATGACCCATCTGCAATAACTAAAGGCCGAGTTAAAGGTTACTTAAACGTTACGAGGGCTTTCGGAGCAGGGTTCCTTAAGCAGCCTAAACAAAATGATGCAATGTTAGAGACTTTCAAAGTTAACTACATAGGGGAATCCCCATATATCACATGCTCCCCTTCACTACATCATCACAGGCTCAACTCAAGTGACAAATTTCTTATACTCTCTTCTGATGGACTTTACCAATACTTCACCAATGAAGAAGCAGTTGCCAAAGTAGAGTCATTCATAACCATGTTTCCAGATAAAAATCCTGCACAACTTCTCACTGAAGAAGCACTGAGTCATGCTGCCGAAAAAGCCGGTATTGAGTTCCATGAGTTGCTTGATATACCACAAGGGGAAAGAAGGCTATACCATGATGACATTTCCATTGTCATAATATCCTTGGAGGGAAAATTATGGCGTTCATTGGTGTGA 1683 0.4005 MGNRISNLCICSAGTGDISGRLQNTFTLLSKKHEKAICNSISYVRPNPPRISGNTFSEDDSALMTFRSVAGATVSANSSSTPSISLDDSLQHSTVLDSSASFESFGSFTSTMMHPQYQNQHDPRSSSVCTSIDEGLSSSPFNRVFNANFIEKYSEEVKLNKPNKISLKKVLSRVFSNAVSFGKGSIFKKSDNVNANANANARVSCSTSTSLSDELRLHDNNYLDDDDDGCGCDDMLMVCENLHMAQGKGGEDRMHIVICEDHGWVYVGIYDGFNGPDATDYLLHNMFYAVHDELKRLLCNQSSNTKEVKSESFSHSDVLEALSEAMRKTEDAFLKIIDEMINHNPVLAMMGSCVLVMLMKGEDVYLMNVGDSRAVLATRIGNPLQLTMDHSTHVKEELYRIRQEHPDDPSAITKGRVKGYLNVTRAFGAGFLKQPKQNDAMLETFKVNYIGESPYITCSPSLHHHRLNSSDKFLILSSDGLYQYFTNEEAVAKVESFITMFPDKNPAQLLTEEALSHAAEKAGIEFHELLDIPQGERRLYHDDISIVIISLEGKLWRSLV* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1917 560 Pfam Protein phosphatase 2C 298 517 IPR001932 -
Mal3g1917 560 SUPERFAMILY PP2C-like 248 552 IPR036457 -
Mal3g1917 560 SMART PP2C_4 235 549 IPR001932 -
Mal3g1917 560 CDD PP2Cc 250 551 IPR001932 -
Mal3g1917 560 PANTHER PROTEIN PHOSPHATASE 2C 309 560 IPR015655 GO:0004722|GO:0006470
Mal3g1917 560 PANTHER PROTEIN PHOSPHATASE 2C 15 298 IPR015655 GO:0004722|GO:0006470
Mal3g1917 560 Gene3D - 212 557 IPR036457 -
Mal3g1917 560 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 309 560 - -
Mal3g1917 560 ProSiteProfiles PPM-type phosphatase domain profile. 235 551 IPR001932 -
Mal3g1917 560 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 15 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1917 Mal-Chr3 79816602 79819264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1917 1 560 PP2C-type Phosphatase Gene Family AT1G07630 42.857 4.76e-168 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1917 - K01102 gmx:100804061 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1917 3 79816602 79819264 Mal3g1917 3 79816602 79819264 ECH