Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1913 ATGTCTCCACCTGGTTCATCAAGATGGAGCCCTACAACTGAACAACTTATGATCTTAGAGGAACTGTATAGAAGTGGAATTAGAACTCCTAGTGCTTCTCAAATTCAGCAAATAACAACTCATCTTTCTTTCTATGGTAGGATAGAAGGAAAAAATGTTTTCTATTGGTTTCAAAATCATAAGGCTAGGGATAGGCAGAAGTTAAGAAGGAAACTTAACAAACAACTGCAGCTACAGCAGCAGCAGATTCAACAACATCAACAACTACAAGTTCATCATTGTCAACTCAATCATGATAATATGATTAGTAACCATTTTGTTGGTAGTACTTTTGGTTACCCTTTTGGATCTAATGCACAAGACTTTTCCTTTTTTAACTCACCTAGCTTGCTTTTTCAGGGATCAGTAGCTGCAAACACATCAGAAGGGGCAATCAATTGCAAATGGAATGGTTATAATAACCAACAAAGTTTGGAGGAGAAGAAAGAGATTGCATTCAACAACTATGGTTGGACAATCATGGATAATGTTAATCATGAAGCACCTTCATGTTGCACTAGACCTCTCAAGACTCTTGATCTTTTTCCACTCACAACAACAAAAATCAAAGACTAG 615 0.3675 MSPPGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQQIQQHQQLQVHHCQLNHDNMISNHFVGSTFGYPFGSNAQDFSFFNSPSLLFQGSVAANTSEGAINCKWNGYNNQQSLEEKKEIAFNNYGWTIMDNVNHEAPSCCTRPLKTLDLFPLTTTKIKD* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1913 204 Coils Coil 69 89 - -
Mal3g1913 204 CDD homeodomain 8 67 IPR001356 GO:0003677
Mal3g1913 204 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Mal3g1913 204 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Mal3g1913 204 Gene3D - 2 67 - -
Mal3g1913 204 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 203 - -
Mal3g1913 204 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 203 IPR044555 GO:0003700|GO:0099402
Mal3g1913 204 SMART HOX_1 4 71 IPR001356 GO:0003677
Mal3g1913 204 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1913 Mal-Chr3 79605635 79606888 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1913 1 74 Wox Gene Family AT2G28610 83.784 7.14e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mal3g1913 Homeodomain 6.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1913 - - cam:101510991 285.419