Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1895 ATGGATAATGGTGAAGATGTTAATGCAGTCGAAATGAACAATGGTAATGATGTGTGCAATGAGGAAGGACACGAGGACTTGGATGGTTACGAAAGTATAGGTGAAATCACAGATGATGATATAAGAGGGATGGAATTTGAATCAGAGAAAAAAGCCATTGAGTTTTACGAAATGTATGCAGAATATCATGGGTTTGCTGTAAGAAGAGATGAGAAAGAATCTGATTTCAAAGGGAATATTGTTATGCGTCAATTGGTTTGCAATAGACAGGGTAAGAGACATAAGAAACATATCTTGCGTATGGACCGAAAAAGGGAGCCAAAGCCAATCACTCGAACAGGTTGTCTTGCTCGGTTCCGTGTAGCATATAATGTTTTGACTAAGAGTTGGAGAGTTGCTGCGTTTGAGTCAGATCACAATCACAAGTTAACTCCACAACATTTTGTTCATTTTATTCCTAAGTATCGTCGATTGAGTGAAGCTGATAAAGCGCTTGCTGACAGTTTGCATACATTTGGTGTTAGAACATGTCATATTTTGGGTTTTATGATGGCTCAGAAAGGTGGTCATAAAGGTTTGGGATTTATCAAGAAGGACCTATATAACCACTTTAGTAATGGAGCTAAGGCTGCAAGGGATAAAGGGGATGCTTTTGCAGCTTTGTGCTATTTGCAAGCTAAAGCTGATAATGACCCGATGTTTTTTTCGAAGTTTACCACAACAGACGACGGTCGGCTACAAAATTTATTTTGGTCTGATGGAACTAGCCGATTTGACTTTGAATGTTTTGGTGATGTGGTTGCTTTCGACACAACCTACAAAAAGAACAGGTACAACAAACCCCTTGTTATTTTTTCTGGGTACAATCATCACGGTGGAACTACAATCTTTGGTTGTGCTTTAGTTTCTGATGAAAAGACAGAGACATATAAGTGGGTTTTAAATGCATTTTCAGAAGCAATGTTTCATAAACACCCAAAAGCAGTTGTTACTGATGGAGATAGTGCAATGAGGGAAGCTATTAGAGTGGAATTTCCAAATGCATCACATCGCCTTTGTTCATGGCATTTAAATAATAACGCTGTTGAGAATGTCAAGAATCCAAAGTTCTTGGAAGAATTTAATTCTTTGATCTATGCTCACTATACCCCTGAGACATTTGAAGCTGAGTGGAAGAGGGTTATTGATGATTGTGGTGTATCAAACAACAAGTGGGTTAAAAAAGTTTACGAGATGAAGACAATGTGGTCAAGTGCATACATGCGAGAAAAATTCTTTTGTGGTATAAGAACTACATCATTGTGTGAAGGTATCAATTCATTTATTAAGGGGTATGTTGAAAAGAAAAACAGCCTTGTTGATTTCATGCAAAATTTTGAAAGAGCTCTGAAAGAATACAGACATAATGAATTATTGTCTGATTTTAAGTCGTTCTATTATGAACCTGTGTTGACAAATGCATTAGAAGGGATTGAGATTGGAGCTTCAAAGATCTTTACAAGCAAAAAGTTTAGGGATGTTAAAAATGAGATAGAAGGTGCAGGTGCATTGAATGTCATTGAACGGATTGAGTTTGGTAATAATGTGACCTTGAAGATGAATAAATTTTGCAATCCAAATTCTAAGTTTTCAGTTTGTCTTGATAAGGTGGAGACTAAATTGTTATGTGACTGTAGACTGTTTGAACGCATAGGAATTCCATGTTCTCACATTATTTGTGCCATGAGGCATGAGCATATTAATGTGTTTCCAGAAAGTTTGATTTGTAAAAGGTGGACTAAATCAGCAAAGAATGATTACATATCATCAACGTCTTTTGAAGAATGTGATTCTGAAAAGTTGTTCATGTTTCGTCGAGGGGCATTGTCTGCTGCATTCAATACTTTGTGCGATATTTCTTGTAAACATGGTGGTTCTTATAAAGAGGCTATAGAAGGAATTCTCAATTTGTGTGAGAAACTAAAGAGGCGTAAGGATGTGTGTGAGAAACGAAAGAGGCGTAAGGATGGCAATGATAAAGATATGGCCAATCCGTTGGTTATTGGTGATCCGTTAAACGTCAAGGGCAAAGGAGCCCCTCGTCGTAATAATAAGAATAAAAAATCACGGAAGGCAAGACGGTGTTCTCATTGTAAAGCACTTAATCACACCAAACGGAAGTGTCCTGACCTAGCTGCACGTGATAATCTACATCTGGTTGATGGTGAGGATTCATCTGGCAAATCTGACAATGAATCAATGGATTTCTATGCTGCTGATAACACTTGTGGTAGTAAACGAAAGAGAAAAAGTGACATTGTTGCTCTCCCAACACAAGACATTGCATCAAAACAAGTTGAAAAAGAGAAGTCCAGTCATAATCTCAAAGATGACATAGACTCTGTACAACTATCAAATGAAAAGGAGACTGCTGATAACACTTGTGGTAGTAAGCGAAAGGGAAAATGTGGCATTGCTGCTCTCTCAACACAAGACTTAGCTTCAAATCAAGTTGAAAAAGAGAAGTCCAGTCATAATCTCAATGACGACATAGACTCTGTAAAACTGTCAAATGGAAATGAGGCTGCTGATAACATTTGTGGTGGTAAACGAAAGAGAAAAAGTGGCATTGATGCTCTCCCAACACAAGTTGAAAAAGAGAAGTCCAGTGGACCTAAGGTAAAGATGCCAGGTACAAATGTACAAGTCAGTCCCGTGGCTACTGCTTTTGCCCCTCAGAATCACGCATCGAATATTGAAAGTAATGTTATGAAACATGGCTTTGTATTTGGTAATCCTACTGTTAGAGTGGAAAGTCAAAATGCAACATGGAACTATGGTTTAGGACAACTTCCCATCACATTTAAACTCTGTTGTATATGGCATAACACATAA 2874 0.3779 MDNGEDVNAVEMNNGNDVCNEEGHEDLDGYESIGEITDDDIRGMEFESEKKAIEFYEMYAEYHGFAVRRDEKESDFKGNIVMRQLVCNRQGKRHKKHILRMDRKREPKPITRTGCLARFRVAYNVLTKSWRVAAFESDHNHKLTPQHFVHFIPKYRRLSEADKALADSLHTFGVRTCHILGFMMAQKGGHKGLGFIKKDLYNHFSNGAKAARDKGDAFAALCYLQAKADNDPMFFSKFTTTDDGRLQNLFWSDGTSRFDFECFGDVVAFDTTYKKNRYNKPLVIFSGYNHHGGTTIFGCALVSDEKTETYKWVLNAFSEAMFHKHPKAVVTDGDSAMREAIRVEFPNASHRLCSWHLNNNAVENVKNPKFLEEFNSLIYAHYTPETFEAEWKRVIDDCGVSNNKWVKKVYEMKTMWSSAYMREKFFCGIRTTSLCEGINSFIKGYVEKKNSLVDFMQNFERALKEYRHNELLSDFKSFYYEPVLTNALEGIEIGASKIFTSKKFRDVKNEIEGAGALNVIERIEFGNNVTLKMNKFCNPNSKFSVCLDKVETKLLCDCRLFERIGIPCSHIICAMRHEHINVFPESLICKRWTKSAKNDYISSTSFEECDSEKLFMFRRGALSAAFNTLCDISCKHGGSYKEAIEGILNLCEKLKRRKDVCEKRKRRKDGNDKDMANPLVIGDPLNVKGKGAPRRNNKNKKSRKARRCSHCKALNHTKRKCPDLAARDNLHLVDGEDSSGKSDNESMDFYAADNTCGSKRKRKSDIVALPTQDIASKQVEKEKSSHNLKDDIDSVQLSNEKETADNTCGSKRKGKCGIAALSTQDLASNQVEKEKSSHNLNDDIDSVKLSNGNEAADNICGGKRKRKSGIDALPTQVEKEKSSGPKVKMPGTNVQVSPVATAFAPQNHASNIESNVMKHGFVFGNPTVRVESQNATWNYGLGQLPITFKLCCIWHNT* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1895 957 ProSiteProfiles Zinc finger SWIM-type profile. 543 579 IPR007527 GO:0008270
Mal3g1895 957 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 40 705 IPR031052 GO:0006355
Mal3g1895 957 MobiDBLite consensus disorder prediction 858 891 - -
Mal3g1895 957 MobiDBLite consensus disorder prediction 1 31 - -
Mal3g1895 957 MobiDBLite consensus disorder prediction 693 709 - -
Mal3g1895 957 Pfam FAR1 DNA-binding domain 54 144 IPR004330 -
Mal3g1895 957 PANTHER OS02G0262500 PROTEIN 40 705 - -
Mal3g1895 957 Pfam MULE transposase domain 266 360 IPR018289 -
Mal3g1895 957 MobiDBLite consensus disorder prediction 662 709 - -
Mal3g1895 957 MobiDBLite consensus disorder prediction 859 874 - -
Mal3g1895 957 SMART 26again6 554 581 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1895 Mal-Chr3 78828420 78832214 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g1895 MULE 7.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1895 - - adu:107487303 733.021