Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1888 ATGGCTTTCACTACCTCAACCCTAGAAGAAAAGAAGAGCAAGGTTTTGTTCATATTGGGTGCAACTGGAACTGGGAAAACTAAACTTTCCATCAACTTAGCTACTCATTTCACTGCTGAAATCATCAATTCAGATAAAATTCAAGTTTATAAGGGTCTTGATATTGTGACTAATAAGGTACCAGAATCTGAACGTTGTTCGATTCCGCATCACATATTAGGCATCATCGATGATCCTGAATATGATTTCACTGTGAATGATTTTTGCAAGCACGTGCTTGAAGCTTTAGATATTATAATTGGCAATGGACACCTACCTATTATTGTAGGAGGGTCAAATTCTTATCTTAAAAAATTAGTTGAGGACCCAACCATTGCATTTCGTTCAAAATATGATTGTTGTTTCATTTGGCTCGACGTCTCTTTGCCAATTCTGTTTCAGTATGTAGACAATAGAGTTGATGAAATGGTTGAGGCAGGGATGGTAGATGAGATTAGAGAATATTTTGTTTCTGGAGCAGACAACACAAAGGGAATTCGAAGGGCTATTGGGGTTCCTGAGCTCGATTCTTATTTTGAGATAGAAAAGAAAAAATGTATTGATGATGCTGAAAAGGAAAAGATATTGAAGGAAGCTATTAGAAAAACCAAACAAAACACTTGCATATTGGCTGAAAATCAAGTCTTGAAGATCGAGAATATGGCTCATATGCTTGGATTGGTGGTGAACAAAATTGATTCTACCAAAGTTTTTGAGGCCATTTTAAGGGGTGAAGATTATAAACGTTTGTACCAAGAGATTGTGATTAAGCCAAGCATGGAGATAGTGAAGAGATTTCTAGAGGAGACAACTCATGGATTTGGAAATGAAAAATATTCAAATTAA 885 0.3593 MAFTTSTLEEKKSKVLFILGATGTGKTKLSINLATHFTAEIINSDKIQVYKGLDIVTNKVPESERCSIPHHILGIIDDPEYDFTVNDFCKHVLEALDIIIGNGHLPIIVGGSNSYLKKLVEDPTIAFRSKYDCCFIWLDVSLPILFQYVDNRVDEMVEAGMVDEIREYFVSGADNTKGIRRAIGVPELDSYFEIEKKKCIDDAEKEKILKEAIRKTKQNTCILAENQVLKIENMAHMLGLVVNKIDSTKVFEAILRGEDYKRLYQEIVIKPSMEIVKRFLEETTHGFGNEKYSN* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1888 294 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 290 IPR039657 -
Mal3g1888 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 155 IPR027417 -
Mal3g1888 294 Gene3D - 12 280 IPR027417 -
Mal3g1888 294 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 142 242 - -
Mal3g1888 294 Pfam IPP transferase 129 228 - -
Mal3g1888 294 Pfam IPP transferase 48 122 - -
Mal3g1888 294 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1888 Mal-Chr3 78719090 78719974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1888 96 284 C2H2 Transcription Factor Family AT2G27760 30.374 6.25e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1888 K10760 - gmx:121173984 417.542