Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1880 ATGGAGTGTGGTTTAGATCTGCATGCAAAGTTGGTGAATGAAACAGAACAAGTTGGTTTTGGAAATTTAGCAGCAGTTTCTGAGAGAGAGATGTGGCTGAATAATACTACAAATGATCAAGATGATGATCTATTAGGTATGAATATGAATGATGATGCATCTATGTTCTATGCTGATTTTCCTCCTTTACCTGATTTTCCATGCATGTCATCATCATCATCATCATCATCTTCATCATCATCAACACCATTGAAAACCATTGCATGTACTTCAACTACAACAACTACAACCTCTTCTTCTTCCTCTGCTTCTTCTTCCTCTGCAGCTTCTTGGGCTGTTTTGAAATCAGATGTTGAAGTAGATCATCAAGGTTATAACATGCATCAACAACATCAACATGGTCATCCATTAGATTATCATCATGGTCATGGTCATGCAACAACTTTGTCACCAACTGCTTCTATGGAGATTTCTCAACAACAACAACAACAACAACAAGATCTTGGTGTTTCTAACAACACTGATGTTGTTGGGGGTGATTGCATGGATGATGTTAATATTATGGATACTTTTGGTTACATGGAGCTTTTAGAAGCAAATGAGTTTTTTGACCCTGCTTCAATTTTTCAAAATGATGAAGAAAACCCTTTAGGTGATTTCACACAAGAACAACAAGTTCAAGTGCAAGATGAATATCAACAACAACATCAACAAGTTCCAATGATAGTGCATGATGATGTTAGGGAAAATAAACCATTACAAGTGAATATTGAGGGAAATAATGATGATGTTTTTGTGTGTGATGGTGTAAATGGGGAAGAGAGTATTCAAGGAGATGAATTAGGTGCATGTGATGGTGTAAGTGATGAAATGAGTATGGTTTTCTTGGAGTGGCTTAAATCTAACAAAGATAGTGTCTCAGCAAATGATTTGAGGAATGTGAAGCTTAAGAAATCAACAATTGAAAGTGCTGCTAGAAGATTAGGTGGTGGAAAAGAAGGGATGAAACAATTGTTGAAGCTTATTCTTGAATGGGTTCAAACTAGTCATCTTCAAAACAAAAGGATCAAAGAAAACAACAACACTAGCACAATTATAGCTTCAAATCTTGTTCCTCAACAACAACAATTTCAAGATTCATGTCAGAACCAAAACACAACAAACACATTTGCACCTGAATCAAACACTTGTTTCAACCAAACATCATGGATAGATCAAACACCTCTCATTGTACCTCCACAACAATATTCGCAACCCATGGTTGGAGTTGGAGTTGGATTTGTTGCTGATCCTTACACAAATGGTTCTGTTTCTAATAACATTAACCCTTACCAACCTAGTGCTACTAATGAATATCACATGTTGGAATCAAATCATTCATGGGGTGCTTCTCAATTCAATGTTGCACCGAATTACAATCAATCATTTGTAGAAAACAGCGGCGGCAATGTGCTACAACCTCATGGTATGAATTTTGGAGGTTATGGAAATCAATATAATTCTTATCAGTTATTTCATGGTCCTGGTGATAGGTTGATGAGGTTAGGTCCTTCTGCTACAAAAGAAGCTCGAAAGAAGAGGATGGCGAGGCAACGGCGGTTTACGTCTCATCATAGGCATCATAATAATAATAACCATCATCAAAATATTCAAGGTTCTGATCCACTTGCAAGATTGGGTAGTGGTGGTGATAATTGCACCAATGTTGTGGCTGCTGGTTCTCATGCAAATCAAGCTAACTGGATGTATTGGCAGACTATGACTGGTGGGACTGCAACTTCTTTGGCACCTGTTGTTCCTGCTGAGCCGCCGCAGCCTACGGTGGACCGTGACCGCCCCACCATGCAGACGCAGAATTCTCATCAGGTTCGAAATGCACCGGATCGGAGACAGGGTTGGAAGCCGGAGAAGAACTTGAGGTTCCTTCTACAAAAGGTGTTGAAGCAAAGTGATGTGGGAAGTTTAGGGAGAATTGTTTTGCCAAAAAAAGAGGCAGAAACTCATTTGCCAGAACTAGAGGCAAGAGATGGAATTTCAATTACAATGGAAGACATTGGAACTTCTCGAGTTTGGAATATGCGCTATAGATATTGGCCAAACAACAAAAGCAGGATGTATTTGCTTGAGAACACTGGTGACTTTGTGAAAGCTAATGGACTCCAAGAAGGAGATTTCATAGTGATATATTCTGATGTGAAGTGTGGCAAATTTATGATAAGAGGAGTTAAAGTGAGGCAGCAACAAGGAACAAAACCAGAGGCAAAAAAAGCAGGAAAATCACAGAAAAATCAACATGGGAATAATGCAGCAAATTCAGCTGGAGTTGCAGTGGATAATAATGGCACATCATCTTCACCAAAGCGAAAAAAATGA 2373 0.3877 MECGLDLHAKLVNETEQVGFGNLAAVSEREMWLNNTTNDQDDDLLGMNMNDDASMFYADFPPLPDFPCMSSSSSSSSSSSSTPLKTIACTSTTTTTTSSSSSASSSSAASWAVLKSDVEVDHQGYNMHQQHQHGHPLDYHHGHGHATTLSPTASMEISQQQQQQQQDLGVSNNTDVVGGDCMDDVNIMDTFGYMELLEANEFFDPASIFQNDEENPLGDFTQEQQVQVQDEYQQQHQQVPMIVHDDVRENKPLQVNIEGNNDDVFVCDGVNGEESIQGDELGACDGVSDEMSMVFLEWLKSNKDSVSANDLRNVKLKKSTIESAARRLGGGKEGMKQLLKLILEWVQTSHLQNKRIKENNNTSTIIASNLVPQQQQFQDSCQNQNTTNTFAPESNTCFNQTSWIDQTPLIVPPQQYSQPMVGVGVGFVADPYTNGSVSNNINPYQPSATNEYHMLESNHSWGASQFNVAPNYNQSFVENSGGNVLQPHGMNFGGYGNQYNSYQLFHGPGDRLMRLGPSATKEARKKRMARQRRFTSHHRHHNNNNHHQNIQGSDPLARLGSGGDNCTNVVAAGSHANQANWMYWQTMTGGTATSLAPVVPAEPPQPTVDRDRPTMQTQNSHQVRNAPDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKFMIRGVKVRQQQGTKPEAKKAGKSQKNQHGNNAANSAGVAVDNNGTSSSPKRKK* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1880 790 MobiDBLite consensus disorder prediction 525 545 - -
Mal3g1880 790 ProSiteProfiles B3 DNA-binding domain profile. 643 745 IPR003340 GO:0003677
Mal3g1880 790 SMART B3_2 643 743 IPR003340 GO:0003677
Mal3g1880 790 MobiDBLite consensus disorder prediction 128 142 - -
Mal3g1880 790 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 27 785 IPR044800 GO:0003700
Mal3g1880 790 SUPERFAMILY DNA-binding pseudobarrel domain 642 739 IPR015300 -
Mal3g1880 790 MobiDBLite consensus disorder prediction 761 783 - -
Mal3g1880 790 MobiDBLite consensus disorder prediction 147 173 - -
Mal3g1880 790 MobiDBLite consensus disorder prediction 745 790 - -
Mal3g1880 790 Gene3D - 639 758 IPR015300 -
Mal3g1880 790 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 27 785 - -
Mal3g1880 790 CDD BfiI_C_EcoRII_N_B3 641 742 - -
Mal3g1880 790 Pfam B3 DNA binding domain 644 740 IPR003340 GO:0003677
Mal3g1880 790 MobiDBLite consensus disorder prediction 520 561 - -
Mal3g1880 790 MobiDBLite consensus disorder prediction 610 626 - -
Mal3g1880 790 MobiDBLite consensus disorder prediction 601 631 - -
Mal3g1880 790 MobiDBLite consensus disorder prediction 128 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1880 Mal-Chr3 78349364 78353328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1880 29 777 B3 DNA Binding Superfamily AT3G24650 46.650 1.10e-162 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g1880 B3 1.7e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1880 - - gmx:100795226 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1880 3 78349364 78353328 Mal3g1880 3 78349364 78353328 ECH