Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1855 ATGGAATACAGAAGGTTTGATAATAGTCAAGAAATTGAGGCTGAAAATGTTGAAGGAAGTCATGAAGTGGTAAACAATGGTGACATGGAAGAAGATGAGGATGGATTTGACTATGGTGGCATGGATTGTGGAATTGATAATGAAGGGGCAGAATATGGTGACAATGAAGAAGATGATGGAATTGGAATTGATGATGAGGTTGAAATTGATGATGAGGATGAAGTATATCAAAATGGTGACATGGAAGAAGAGGATATTAATGATGAGGAAGAAGAGGATATTAATGATGAGGATGAAGTAGTTCAAAATGGTGACACGGAAGAAGGGGATGGAAATGAGGCTCAAGGAGTTCAAAATGATGACATAGAAGAAGATGGAAGTGGTTATGAAGGCCAATATGTCCTAGTTAATAGTGTTGAGGACATTGCGGCATTGGACCTGAGTGGTTTAGGGCCTTTATGTGCAAGGAAATTTGAATTTGGAGGCCTGGAAATTGCTTATCAGTTATATATGTCGTATGGAAGAGCGAATGGATTTTCAGTCCGGAAAGGCAAGTTAATTTACTGCAAAACGGGAGAAGTAGTGCAACGCACATTTGTTTGCCATAGACAAGGATATAGGGAAGTCAGAGCACTAACTGAGGAGAATAGAAAACGTCCGGTAAAACTTGAGACTCGATGTGGATGTAAAGCTTTGTTTCGGGTACACATAGATGTTTTCACAAAACGGTGGCGAGTTACAGTTTTTACAAATGAGCACAACCATGAGCTAGTTTCTCAGGAACATTGTGGATTGCTACCTAAACACTGTGCAATGACAGATTCAGACGTGATGCAAATGAACGCTAAGGTAAAAAGTGGCATTTTACCTTCTCGCATATATTCTTCATTTGCACATCAATCAGGAGGATATGAGAAAATTGGTTTCCGTCGGAAAGACCTGTATAATCAATTAGCGAGACAACGACGTTTGCAACAGTCTGATGCAAAATCTGCACTAAATTATCTTCGTGGCTTGCGTAGGCTAGAACACATGTTTTGGTGTGACGGAAAGAGTCGTCTTGATTACCAAGTTTATGGCGACGTTGTTGCATTTGATGCAACATATGGTAAGAACAAATACTATTGCCCTTTAGTTGTGTTTGCTGGTGTGAATAATCATAACTCTACTATAATTTTTGGTGGAGCTATTGTTGCTGATGAAAAGGAAGAAACCTATGTCTGGGTGCTTTCACGGTTTTTGGAAGCAATGTCTGGAAACTCGCCATCTGCTGTAATCACTGATGGTGATTTAGCAATTAAAAATGCAATAAAACGAGTTTTTCCAGATGCTCATCATAGACTGTGTGCGTGGCACTTGCTTCGGAATGCAACCTCCAACATAGGTGATCCTGCATTTGTGGGAAGTGGGCTGAAACTGTTGATAAATTTGGGTTGCATGACAACAATTGGATCAAAGAAACATATGAGAAGAGAAAGTCATGGGCAACAGCACATACTCGTGGCCACTTCTTTGCAGGATTCAGAACTACATCTCGAAGTGAGGGGCTGCATGCAGAGTTAG 1563 0.4037 MEYRRFDNSQEIEAENVEGSHEVVNNGDMEEDEDGFDYGGMDCGIDNEGAEYGDNEEDDGIGIDDEVEIDDEDEVYQNGDMEEEDINDEEEEDINDEDEVVQNGDTEEGDGNEAQGVQNDDIEEDGSGYEGQYVLVNSVEDIAALDLSGLGPLCARKFEFGGLEIAYQLYMSYGRANGFSVRKGKLIYCKTGEVVQRTFVCHRQGYREVRALTEENRKRPVKLETRCGCKALFRVHIDVFTKRWRVTVFTNEHNHELVSQEHCGLLPKHCAMTDSDVMQMNAKVKSGILPSRIYSSFAHQSGGYEKIGFRRKDLYNQLARQRRLQQSDAKSALNYLRGLRRLEHMFWCDGKSRLDYQVYGDVVAFDATYGKNKYYCPLVVFAGVNNHNSTIIFGGAIVADEKEETYVWVLSRFLEAMSGNSPSAVITDGDLAIKNAIKRVFPDAHHRLCAWHLLRNATSNIGDPAFVGSGLKLLINLGCMTTIGSKKHMRRESHGQQHILVATSLQDSELHLEVRGCMQS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1855 520 Pfam FAR1 DNA-binding domain 169 258 IPR004330 -
Mal3g1855 520 MobiDBLite consensus disorder prediction 49 106 - -
Mal3g1855 520 MobiDBLite consensus disorder prediction 1 127 - -
Mal3g1855 520 Pfam MULE transposase domain 362 456 IPR018289 -
Mal3g1855 520 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 156 462 - -
Mal3g1855 520 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 156 462 IPR031052 GO:0006355
Mal3g1855 520 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1855 Mal-Chr3 77931967 77933630 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g1855 MULE 1.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1855 - - adu:107465206 365.54