Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1846 ATGTCTTTTAAATCGGCTGACGAATGTAAGTCATTCTATCGTCAATATGCTATCAAACTAGGGTTTGGGATTAAAACTAGAAACTCTAAGAAAGGGGCTGATGACAAGTTAAGATACTTCATTCTAACGTGTGCATGGGAAGGTCACCACGAGTCGATAATTGACTCAACTCTGAAGACAAATCCGACAAAGAAAGTTGAGTGCTCAGCTAAGATAACAGTGGGTTTGAGGGAAGGTCTATGGTATATTTTGTCGTTTACACCTGATCATTGTCATGAAATTAGTCCAAGTAAATCACTTGGGAATAAGAAGATTGATGAAGCAGGTGTTAGGGTGAACAAGAGTTTCCGCTCTATTGTATGTGATGTCCATGGTGGTTACGAAAATCTAACATCTGTGTCTAAAGAAAGACGACGCATCCTTGGGAAAGAAGGTGTCACTAGTCTTGGTTTGACATCCTCGTTTACTGTTTTGGAGGAGAGTATGGTGTGTGGGAAACCAAGAGAAACGAAGTATCAAGTTGATTTTAACCGTGCAAATCATAATGTTCGGTGCACTTGTTTGTTGTTTGAGTTTAGAAGCATTATGTGCAGACACTCGCTTTTCGTATTTGGTCAAGAAAGAGTGAAAGAGGTTCCATCTCACTATATCTTGCCTAGATGGAGTAAAACTGTGAAAAGGAAATATGCACACATGAAGACAAGTTACGCTGTCAAAAATTTACAGCCACATATAGAAAGATTTGACGGTCTGTACAAGACATTTTATGAAATCGCGGAGTATGCAGCTGAGTCACCTATTGAAACTAATAATTTGCATGAAGAAATGAAAACATGGTATAGGAAGAAGTTGGGTAAAATTAATTCAGACCGTGTATGCGAGAAGGGAGGGGATGATAGCTTAAACGCGTTGGGAGACAGGGCATAA 927 0.3937 MSFKSADECKSFYRQYAIKLGFGIKTRNSKKGADDKLRYFILTCAWEGHHESIIDSTLKTNPTKKVECSAKITVGLREGLWYILSFTPDHCHEISPSKSLGNKKIDEAGVRVNKSFRSIVCDVHGGYENLTSVSKERRRILGKEGVTSLGLTSSFTVLEESMVCGKPRETKYQVDFNRANHNVRCTCLLFEFRSIMCRHSLFVFGQERVKEVPSHYILPRWSKTVKRKYAHMKTSYAVKNLQPHIERFDGLYKTFYEIAEYAAESPIETNNLHEEMKTWYRKKLGKINSDRVCEKGGDDSLNALGDRA* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1846 308 Pfam SWIM zinc finger 184 204 IPR007527 GO:0008270
Mal3g1846 308 PANTHER OS03G0843700 PROTEIN 1 145 - -
Mal3g1846 308 PANTHER OS03G0843700 PROTEIN 155 277 - -
Mal3g1846 308 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 145 IPR031052 GO:0006355
Mal3g1846 308 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 155 277 IPR031052 GO:0006355
Mal3g1846 308 Pfam FAR1 DNA-binding domain 11 95 IPR004330 -
Mal3g1846 308 ProSiteProfiles Zinc finger SWIM-type profile. 172 208 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1846 Mal-Chr3 77732805 77734656 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g1846 FAR1 2.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1846 - - gmx:102667848 137.502