Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1827 ATGAGTTGCTTTTCATGTTTCTCGTCCCAATCGTCCCAAGAAAAAAAAGTAACAAAGAGGCCTAACCATAACAATAACAATGGAAAGAGGATACAACATAATCCTACTCAAATATCTCCTCAGAAAGCATCTCAAACTCTGCCAGAGAATCATTATCACAAGGTAAGGACAAGCCCACAAGGAGAACCTAAAATAAATAAAGAGACCAACAAAGATAATGGTCACAACATTGCTGCACAAACTTTCACCTTCAGGGAATTGGCTACTATCACAAGAAACTTTAGGCAGGAAAATCTAATAGGTGAAGGTGGATTTGGAAGAGTTTATAGGGGAAGACTTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTAGACAGGAATGGATTGCAAGGAAACAGAGAGTTTCTGGTTGAAGTATTGATGTTGAGCCTTTTACACCATCAAAATCTGGTTAATCTAATTGGATATTGTGCTGATGGAGATCAAAGACTTTTGGTATATGAGTACATGTCATTAGGATCTCTTGAGGATCATCTACTTGATCTTACACCACAACAAAAGTCATTAGATTGGTTCACAAGAATGAAAATAGCATTGGATGCTGCAAAAGGACTAGAATATTTACATGACAAAGCCAATCCACCTGTCATATACCGTGACTTAAAATCTTCCAACATCTTATTAGACAAAGATTTCAATGCAAAACTCTCTGATTTTGGACTAGCCAAACTGGGACCTACAGGGGACATGTCTCATGTGTCTTCAAGAGTGATGGGGACTTATGGATACTGTGCACCTGAATATCAAAGAACAGGTCAACTCACTGTGAAATCAGATATATACAGTTTTGGTGTTGTTTTGCTTGAATTGATTACTGGAAGGAGAACTATTGATAACACAAGACCATCAAGGGAGCAAAATCTTGTTTCTTGGGCATATCCAGTATTCAGAGAGCCACATAGATATCCAGAATTAGCGGATCCAAACCTTGAAGGTAACTTTCCAATGAGATCACTTCATCAAGCAGTGGCCGTAGCAGCAATGTGTCTTAATGAAGAACCATCAGTGAGACCATTAATAAGTGATGTTGTAACAGCTCTTAGTTTCCTTGGCATAGATCCAATGAATCAAGACCCACAAGTTTTGTCACCAATTGACATGCCATCTCCAACACAAGAAAATGAAGAAAATAGTGCAATCTTGAGTCTTCTTGACGATGATAGTGCCGTTGAACGCCAAAAAGCCGTTGATGAAGCCATGGAATGGGGTTCAAATACTAGAAATAAACCAAGCCGTGACAGTTCTTCATCTTTGTAA 1320 0.3871 MSCFSCFSSQSSQEKKVTKRPNHNNNNGKRIQHNPTQISPQKASQTLPENHYHKVRTSPQGEPKINKETNKDNGHNIAAQTFTFRELATITRNFRQENLIGEGGFGRVYRGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMSLGSLEDHLLDLTPQQKSLDWFTRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDKDFNAKLSDFGLAKLGPTGDMSHVSSRVMGTYGYCAPEYQRTGQLTVKSDIYSFGVVLLELITGRRTIDNTRPSREQNLVSWAYPVFREPHRYPELADPNLEGNFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGIDPMNQDPQVLSPIDMPSPTQENEENSAILSLLDDDSAVERQKAVDEAMEWGSNTRNKPSRDSSSSL* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1827 439 MobiDBLite consensus disorder prediction 1 72 - -
Mal3g1827 439 CDD STKc_IRAK 100 368 - -
Mal3g1827 439 MobiDBLite consensus disorder prediction 55 71 - -
Mal3g1827 439 Gene3D Phosphorylase Kinase; domain 1 64 170 - -
Mal3g1827 439 Pfam Protein kinase domain 95 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1827 439 MobiDBLite consensus disorder prediction 1 15 - -
Mal3g1827 439 ProSiteProfiles Protein kinase domain profile. 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1827 439 Gene3D Transferase(Phosphotransferase) domain 1 171 378 - -
Mal3g1827 439 MobiDBLite consensus disorder prediction 383 402 - -
Mal3g1827 439 MobiDBLite consensus disorder prediction 381 439 - -
Mal3g1827 439 MobiDBLite consensus disorder prediction 24 53 - -
Mal3g1827 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Mal3g1827 439 SUPERFAMILY Protein kinase-like (PK-like) 80 395 IPR011009 -
Mal3g1827 439 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Mal3g1827 439 SMART serkin_6 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1827 439 PANTHER OS07G0668900 PROTEIN 2 430 - -
Mal3g1827 439 MobiDBLite consensus disorder prediction 425 439 - -
Mal3g1827 439 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 2 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1827 Mal-Chr3 77078477 77081922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1827 1 438 Glycoside Hydrolase AT3G07070 65.919 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mal3g1827 Pkinase 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1827 - - gmx:100798806 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g1827 3 77078477 77081922 Mal3g1827 3 77078477 77081922 ECH
Mal3g1827 3 77078477 77081922 Mal4g0613 4 6263136 6265167 ECH