Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1801 ATGATTTTTGATAGCATTGACGATGCTTGGAAATTTTACAATGATTATGGCGGAAAATTTGGATTTGGAGTGAGGAAACAATATTCACACAAGAACAGAAATGGTACAATTACTTCTTACAAGTTTGTTTGTTGTAAAGAAGGTGTGCGAAAACCAGATAAACGGGATTATAAAACCATCAATCCGAGACCGGAGACCAGGACAAATTGTAAAGCAAGGTTAGGCATTAAGAATATGAGTGGAAAATTTATGGTGGTTGATTTTGAGGAGGAACATAACCACGATTTACATACACCAGAAACAACTCACATGCTGCCATCTCAAAGAAATATCTCTCAAATTCATTGCCAGCAAATTGATCTAGCTGATGATGCTGGATTACAACAAAGAAAGTCATTTGACTTGATGAGTAAAGAAGTGGGAGGTAGAACTAACTTGAGATTTATTCTTGGTTATTTATTGCAATACTTTCAACAAAAGATGGTGGAAAATCCAACTTTCTATCATGCATATCAAATGGATACTGAAGATCAAATCACCAATGTGTTTTGGGCAGATGCAAGTATGCTAATTGATTATGAGTGTTTTGGTGATGTGATTTCTCTTGATTCAACATATTGCACAAATACTTCACATAGACCACTTGCAGTGTTCTCAGGATTTAACCACCATCGAGGAGCTGTGATTTTTGGGGCTGCATTGTTGTATGATGAAACATCTGAGTCATACAAGTGGCTCTTTGAGACATTTTTAGAGGCTCATAAGCACAAAATGCCTCAAACAGTATTTACTGATCAAGATCAATCAATGGCGAAAGCATTAGTTGAGGTTATGCCTAAAGTTTACCATGGCTTATGTACGTGGCACTTGATGCAGAATGGCATAAAGCACTTAGGAAATTTAATGAAAGGTGGATCTAGTTTTCTTAGTGACTTCCAGAAGTGCATGTATGGCTATGAAAATGAAGAACAATTTGAAGAAGGATGGAGAACTCTCCTTGTGAAGTATGGGGATCATGTTAGAAAGGAAAATAGTTGGTTGCAAAGAATGTACTCTATAAAGGAGAAATGGGCATCGTGTTACATGAAGAAAGTTTTTACATTAGGAATGCGAAGTACTCAACTTAGTGAAAGTGTGAATGCAAATATTAAAAATTTGCCCCGCCTTATTAGGATAGCTACTGAAGCATGTAGAAGTCCAGAAACATTCACGCTCCTTTGTAAAGTTGCTAATGAATTGAATAGGCACTTGCTAGAGTTTCAACACAATCCAACAAGTATCTGTCAAGTGAATGAGTTTGTTGCTAAAGTTAAAGAGATTGAAAGTAGCAATGATGGTTCGTCAAAAGCAAAAGGCTTCAAAAACAGAGAAGGCAAAAGGGGTACAAAACGCTTACAAGGTTGGGTAGAGCGCGAACTTTCTAAAGGCAAGAAAAATGGTGACTTGAAAGCTTCAAAAGTTCAGAACTCTAAAAAGCAGACACAAGACCAAATCCAATACGAGGTATACAATGTTGCATACAATGGTGACAGTCGTGGTTCACAAAGCCAGGTCCAATATGAGCTATACAATGTTGCATACAATGGTGACAGAGGTGATTCACAAAGCCAGGTCCAATATGAGCTATACAATGTTGCATGCAATGGTAACAAAGGGGATCCACAATTTATTTTTGGATATTGCAACTCCAACTTTGTTGGTACATGCTATTTTGGAATTGGTACTTAA 1728 0.3709 MIFDSIDDAWKFYNDYGGKFGFGVRKQYSHKNRNGTITSYKFVCCKEGVRKPDKRDYKTINPRPETRTNCKARLGIKNMSGKFMVVDFEEEHNHDLHTPETTHMLPSQRNISQIHCQQIDLADDAGLQQRKSFDLMSKEVGGRTNLRFILGYLLQYFQQKMVENPTFYHAYQMDTEDQITNVFWADASMLIDYECFGDVISLDSTYCTNTSHRPLAVFSGFNHHRGAVIFGAALLYDETSESYKWLFETFLEAHKHKMPQTVFTDQDQSMAKALVEVMPKVYHGLCTWHLMQNGIKHLGNLMKGGSSFLSDFQKCMYGYENEEQFEEGWRTLLVKYGDHVRKENSWLQRMYSIKEKWASCYMKKVFTLGMRSTQLSESVNANIKNLPRLIRIATEACRSPETFTLLCKVANELNRHLLEFQHNPTSICQVNEFVAKVKEIESSNDGSSKAKGFKNREGKRGTKRLQGWVERELSKGKKNGDLKASKVQNSKKQTQDQIQYEVYNVAYNGDSRGSQSQVQYELYNVAYNGDRGDSQSQVQYELYNVACNGNKGDPQFIFGYCNSNFVGTCYFGIGT* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1801 575 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 385 IPR031052 GO:0006355
Mal3g1801 575 MobiDBLite consensus disorder prediction 444 467 - -
Mal3g1801 575 PANTHER OS03G0181600 PROTEIN 1 385 - -
Mal3g1801 575 Pfam FAR1 DNA-binding domain 11 97 IPR004330 -
Mal3g1801 575 Pfam MULE transposase domain 199 293 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1801 Mal-Chr3 75990788 75993281 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g1801 MULE 1.1e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1801 - - gmx:100795482 513.842