Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1760 ATGACATTTACCTCAGAAGAGGAAGTTACCTTGTATTACATGAATTATGCTCGATATATGGGTTTTGGAATGAGTAAAATAAGTTCAAAAAATGGTGATGATGGGAAAAAATATTTTACTTTAGCATGTAGTCGTGCAGGGAAGTACGTGAGCACTTCAAAGATTCTTTTGAAGCCAAATCCTATCACTAAAACACAATGTAAGGCAAGATTGAATGCATGTATAGGTTTGGATGGAAGAGTTGTAGTTACAAGTGTTATTCTTGACCATAATCATGACCTTAGCCCAAACAAAGCACGCTATTTTAGATGTAACAAGAATATGGGGTCTCACATAAAAAGGAGATTAGAGATTAATGATCAAGCAGGTATCAATGTCAGTAGAAATTTTAGATCTGTGGTTGTTGAAGAAAATGGTTATGAGAATCTCACATTTGGTGAAAAAGACTGCAGAAACTATATAGACAAGATAAGGCGGCTAAGGCTTGGGACAGGAGACGCTGAAGCAATACAAAACTATTTTGTTAGAATGCAAAAGCAAAATAGTCAATTTTATTATGTAATGGATGTGGATGATGATAGCCGTTTAAGAAATGTATTATGGGCAGATGCGAGAAGTAGGGCTGCATATGAATATTTTTGTGAAGTCATAACTTTTGACACCACCTACTTAACAAACAAATATGACATGCCTTTTGCCCCTTTTGTTGGTGTAAATCATCACGGTCAAGTCCATGCTAAAACTTTTACTTGGTTGTTCACAACTTGGTTAGAATGCATGTATGGACGCGCTCCAAATGCCATTATTACTGATCAGGATAAGGCAATGAAAAAGGTGATTGTGGTTGTCTTCCCAAAAGCTCGTCACAGATGGTGCTTATGGCATTTAATGAAAAAGGTACCAGAAAAGTTTGGTAGGCACTCAGATTATGAGTCTATTAAAATACTTTTGCATGATGTTGTATATGATTCTTTGAGCAAAAGTGATTTCAAAGAGAGGTGGGAAAAAATGATTGAATGTTATGAACTACATGATAATGAATGGTTAAAAGGGATATTTGATGAGCGACATCGTTGGGTTCCCGTGTATGTGAGGGACGTGTTTTGGGCCGGGATGTCAACAACACAACGAAGTGAAAGTATGAACTCATTTTTTGATGGGTATGTAAGTTCAAAGACATCATTGAAGCAATTTGTTGAACAATATGACAATGCATTGAAAGATAAGATTGAAAAGGAAAGCAGGGCTGATTTTGGTTCATTTAATTCAGTAATTGCTTGTGTAAGTCATTTTGGCTTTGAGTCACAATTCCAAAAATCATTTACCAATGCAAAATTCAAAGAATTTCAAGTAGAAGTTGCTTCTATGATGTATTGCAATACTTCATTTGAGGAATTGGAGGGTTTACATTCTATATTTTCTGTGATAGAAAGTAAGAAAGTATATGAGAAAACAAAAGATGTGGTATTCAAGGTGTCCTTCAATGAAAATGACTTTGAGTTACAATGTACCTGCTGCTTATTTGAGTTTAAAGGCATTTTGTGTAGACACATCATTTGTGTGCTTAAACTCTCTGGTAAAACAGAGTCAGTGCAATCTCATTATATTTTTTCTCAGTGGAGGAAGGATATAAAGCGACGACATACACTTATTAAATGTGGTTTTGATAACTTGAATGGAAATGCTGAGCTACAACGTGTTGGTAAAGCATGTGATGCATTTTACGAAGTTGCTTCTACGGGGATAAGTACTGAAGAAGATTTATTGAAATTAACATGTAAAAAAACATCTCCTATAATTATAGAAGAAGTTAATTCAACTCAAAATCAAGTGCCTATCATTCTGGATCCCGAAGTTGCTCGAGGCAAAGGGCGTCCTCCTTCAAAACGAAAGGCTTCTAAAGTTGATCAAATTATAAAGAAGAAGCTTGCAGGAAAGAAAACTCAAAGTAGCCAAAAAATAACAGTTTCTCAAAGTTCAGAAGAGGTGATTTTGAGTTTGTTAAATTTATTTTCTCGAGTTGAACGTACTAGTAGATATCTCTAA 2046 0.3509 MTFTSEEEVTLYYMNYARYMGFGMSKISSKNGDDGKKYFTLACSRAGKYVSTSKILLKPNPITKTQCKARLNACIGLDGRVVVTSVILDHNHDLSPNKARYFRCNKNMGSHIKRRLEINDQAGINVSRNFRSVVVEENGYENLTFGEKDCRNYIDKIRRLRLGTGDAEAIQNYFVRMQKQNSQFYYVMDVDDDSRLRNVLWADARSRAAYEYFCEVITFDTTYLTNKYDMPFAPFVGVNHHGQVHAKTFTWLFTTWLECMYGRAPNAIITDQDKAMKKVIVVVFPKARHRWCLWHLMKKVPEKFGRHSDYESIKILLHDVVYDSLSKSDFKERWEKMIECYELHDNEWLKGIFDERHRWVPVYVRDVFWAGMSTTQRSESMNSFFDGYVSSKTSLKQFVEQYDNALKDKIEKESRADFGSFNSVIACVSHFGFESQFQKSFTNAKFKEFQVEVASMMYCNTSFEELEGLHSIFSVIESKKVYEKTKDVVFKVSFNENDFELQCTCCLFEFKGILCRHIICVLKLSGKTESVQSHYIFSQWRKDIKRRHTLIKCGFDNLNGNAELQRVGKACDAFYEVASTGISTEEDLLKLTCKKTSPIIIEEVNSTQNQVPIILDPEVARGKGRPPSKRKASKVDQIIKKKLAGKKTQSSQKITVSQSSEEVILSLLNLFSRVERTSRYL* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1760 681 SMART 26again6 501 528 IPR006564 GO:0008270
Mal3g1760 681 ProSiteProfiles Zinc finger SWIM-type profile. 490 526 IPR007527 GO:0008270
Mal3g1760 681 Pfam MULE transposase domain 216 299 IPR018289 -
Mal3g1760 681 PANTHER OS03G0843700 PROTEIN 1 581 - -
Mal3g1760 681 Pfam FAR1 DNA-binding domain 12 95 IPR004330 -
Mal3g1760 681 Pfam SWIM zinc finger 497 521 IPR007527 GO:0008270
Mal3g1760 681 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 581 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1760 Mal-Chr3 74788038 74790150 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g1760 FAR1 5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1760 - - cam:101506732 974.926