Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1753 ATGGGTTTCAGCTGCTGTTCAAATCTGTTATTTGTTTTGTTCATTCTGTTTTTCTATTTGTTACATGTTAGTATCGATATAGACACCATCACATCATCTCAATTCATTAAGGACCCTGAAACTCTACTCTCCAAAGATGGTTACTATGCCTTTGGATTCTTTAGCCCTGAAAATTCTACAAATCGCTACGTTGGAATATGGTGGAAGTCTGAAACTTCGCTCATATGGGTGGCTTACAGAAACCAACCGTTGAATGATTCTAATGGGATTGTCACACTATCTGAAGATGGCAATCTTGTAGTATTGAATGGACAGAAACAAGCCATTTGGTCATCAAATGTATCAAACATAGAATCCAATACCACAGCCCAGTTTTCTGACTTTGGTAACCTTGTCCTACTGGAGAGCACAACCGGAAACATGTTATGGCAGAGTATTCAACAACCTACAGATTCATTACTGCCTGGTATGAAACTTTCTATCAACAAAAGAACAGGTGAGAAATCAAAACTAAGATCATGGAAAAGCCTTTCTGATCCATCTGTTGGGAGTTTCTCTTCTAGTACTGTTGAACGCCGAAATATAATTGAAGCGTTTATTTGGAATGAAACTCAACCATACTGGCGCAGCGGTCCCTGGAACGGGGGGGTCTTTACAGGGATAGATACTATGACAATTGCATATTTTAACGGTTTTCAAGGTGGAGATGATGGAGAAGGGAATATAAATATATATTATACGATCCCAGATGATGAGGTTTTCTTGATCTATAACCTGAATTCAGAAGGAAAATTTGAAGAAACATCGTGGAATGATGAGAAGAAAGAAGTGCAAGTTACATGGACTAGCCGAAAATCGGAGTGTGATGTTTATGGTACATGTGGAGAATTTTCAAGCTGTAGTTCATTGAGCAGACCAATATGCAGCTGTTTGAAATCATTTGAACCAAGGAGCATACAGGAATGGAATAGAAATAACTGGACTGGTGGTTGTGTTAGGAAGACACCTTTGCAGTGTGAAAGGGTGAACAATGAAACCACAAGTACAAAGGAAGATGGTTTTTTGAAATTGAAGATGGTTAAAGTACCTGTGACACCAGACATATGCAGAATATTATGCTTGGAGAATTGCTCTTGCGTTGCGTACTCTAATGATGCTGGGATTGGCTTGATAATAGGAACTCTCATAATTTCTATTTGTGCATATATCAAATCAACAAGGAAAAAGAACAACAAAGCTTTCAAACTATTTAATAAAGGTGGAACATCAGAAGAAAATAATAGTGACGATGTATTTGGAGGGTTATCCGAAGTTCGACCACAAGAGCTATTGCTATTTGATTTTGGAAAGCTTGCAACTGGTGGTTTTAGTCCCGTGTACAAGGGGAAACTGCAAGACGGTCGAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGCCTAGGGCTAGAAGAATTCAAGAATGAAGTAATGGTCCTTTGTAAGCTTCAACACCGTAATCTTGTAAGACTTCTTGGCTGCTGCATTGACGGTGATGAAAAGATGTTGATGTATGAATACATGCCAAACAAAAGTTTGGATGCATTTATCTTTGATCTATCAAAAAATAAACTCCTAGATTGGAGGACCTGTTATAGTATTATAGAAGGAATAACTCGAGGATTGTTGTATCTTCACAGAGATTTCCGACTCAGAATTATACACAGAGATTTGAAGGCAAGTAATATCTTGTTAGATGAGGAGATGAATCCAAAAATTTCTGACTTTAGAATGGCTAGAATCTTTGGTGGAAGAGAAGATCAAGCCAATACTACTAGGGTTGTCGGAACTTATGGCTATATGTGTCCCGAATATGCAATGCAAGGACTTTTTTCACAGAAATCAGATATCATTAGTGGGAGAAGAAACTCAAGCTTTTATGACAATGAGCATACTCTGAGTCTTTTAGGATTTGTGTGGATACAATGCAGGGAAGAAAATATTTTATCCTTAATAAATCCAGAAATATATGATCATAGTCATCATAAGAATATTTTGAGATGCATACATATAGGACTGTTATATGTACAAGAATCAGCTGTAGACAGGCCTAATATGGCCACAGTCATTTCTATGCTTAACATTGAGGTTGCATCACTTCCTCCTCCAAGTCAACCTGCATTCATCCTGAAGCAGAATATATTAAATTCAAAGTCACCTGATGAAAATCAAAGTACATGTTCCGTTAACACTGCCGACATTACAGATATATGTGGCAGATAG 2262 0.3762 MGFSCCSNLLFVLFILFFYLLHVSIDIDTITSSQFIKDPETLLSKDGYYAFGFFSPENSTNRYVGIWWKSETSLIWVAYRNQPLNDSNGIVTLSEDGNLVVLNGQKQAIWSSNVSNIESNTTAQFSDFGNLVLLESTTGNMLWQSIQQPTDSLLPGMKLSINKRTGEKSKLRSWKSLSDPSVGSFSSSTVERRNIIEAFIWNETQPYWRSGPWNGGVFTGIDTMTIAYFNGFQGGDDGEGNINIYYTIPDDEVFLIYNLNSEGKFEETSWNDEKKEVQVTWTSRKSECDVYGTCGEFSSCSSLSRPICSCLKSFEPRSIQEWNRNNWTGGCVRKTPLQCERVNNETTSTKEDGFLKLKMVKVPVTPDICRILCLENCSCVAYSNDAGIGLIIGTLIISICAYIKSTRKKNNKAFKLFNKGGTSEENNSDDVFGGLSEVRPQELLLFDFGKLATGGFSPVYKGKLQDGREIAVKRLSRASGLGLEEFKNEVMVLCKLQHRNLVRLLGCCIDGDEKMLMYEYMPNKSLDAFIFDLSKNKLLDWRTCYSIIEGITRGLLYLHRDFRLRIIHRDLKASNILLDEEMNPKISDFRMARIFGGREDQANTTRVVGTYGYMCPEYAMQGLFSQKSDIISGRRNSSFYDNEHTLSLLGFVWIQCREENILSLINPEIYDHSHHKNILRCIHIGLLYVQESAVDRPNMATVISMLNIEVASLPPPSQPAFILKQNILNSKSPDENQSTCSVNTADITDICGR* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1753 753 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Mal3g1753 753 CDD B_lectin 33 145 IPR001480 -
Mal3g1753 753 Pfam D-mannose binding lectin 74 175 IPR001480 -
Mal3g1753 753 Pfam PAN-like domain 349 385 IPR003609 -
Mal3g1753 753 Pfam Protein kinase domain 450 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1753 753 Gene3D Phosphorylase Kinase; domain 1 451 521 - -
Mal3g1753 753 SMART blect_4 33 149 IPR001480 -
Mal3g1753 753 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 391 749 - -
Mal3g1753 753 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
Mal3g1753 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Mal3g1753 753 SMART serkin_6 445 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1753 753 ProSiteProfiles Protein kinase domain profile. 445 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1753 753 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 389 - -
Mal3g1753 753 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Mal3g1753 753 PIRSF SRK 388 753 IPR024171 GO:0004674
Mal3g1753 753 PIRSF SRK 1 441 IPR024171 GO:0004674
Mal3g1753 753 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 391 749 - -
Mal3g1753 753 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 389 - -
Mal3g1753 753 SUPERFAMILY Protein kinase-like (PK-like) 449 728 IPR011009 -
Mal3g1753 753 Gene3D - 22 147 IPR036426 -
Mal3g1753 753 Gene3D Transferase(Phosphotransferase) domain 1 522 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1753 Mal-Chr3 74528671 74537567 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1753 450 733 Receptor kinase-like Gene Family AT4G05200 53.061 5.21e-98 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal3g1753 Pkinase 2.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1753 - - cam:101513672 1084.32