Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1748 ATGAAACTTTCAATCAACAAAAGAACCGGTAAGAGTATAAAACTCACATCATGGAAAAGCCCTTCTGACCCCTCCATTGGCAACTTCTCTTCTAGTACTGTTGAACGCCTAAATATACCTGAACTGTTCATTTGGAATGAAACTCGGCCATGTTGGCGCAGTGGTCCTTGGAATGGTGGGGTCTTTACAGGGATACAAACAATGAAACTTGCATATTTTAATAGTTTTCAAGGTGGAGATGATGGAGAAGGAAATATTGTTATATTTTATACTATATCAAATGACCAGGAATTAATGATCTATCACCTGAATTCACAAGGAATAATAGAAGAAACATGGTGGGATGATGAGAAGAAAGAAGAGCTAGTTACATGGACTAGCCGAAAATCAGAGTGTGATGTTTATGGTACATGTGGAGAATTTTCAAGCTGTAGTTCATTGAGCAGACCAATATGCAGCTGTTTGAAAGGATTTGAACCTAGGAGCATACAGGAATGGAATAGAAATAACTGGACTGGTGGTTGTGTTAGGAAGACACCTTTGCAGTGTGAAAGGGTGAACAATGAAACCACAAGTACAAAGGAAGATGGGTTTTTGAAATTGAAGATGGTTAAAGTACCTGATTTTGCAGAAGGAATAGCTGTGACACCAGACATATGCAGAAGATTATGCTTGGAGAATTGCTCTTGCGTTGCGTATTCTCACGATACTGGGATTGGCTGTATGTATTGGACTAGAAATTTATTGGACATACAACAACTCGAAAGTGGAGGGCTTGATCTATATTTTCGGGTAGCCCACACAGAGCTTGAGAGAGGAAGAAACAAAACGGTCATCATTATAATTATCGTGATAATAGGAACTATCAACATTGTCATTTGTGCATATATCATGTGGAGACGGACTTCAAACAACTCAACTAAATCAACAACGAAAACAAAGAACAAAAGTTTCAGACTATTTAATAAAGGTGGAGCCTCAGAAGTTCATACTAGTGACGACATAATTGGAAAACTGTCCCAAGCTAAACTACAGGAGCTATTACTATTTGATTTTGGAAAGCTTGAAATTGCCACAAACAAATTTGCCTTGTCCAACAAACTTGGAGAGGGTGGTTTTGGTCCTGTATACAAGGGGAAACTACAAGATGGTCAGGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGGCTAGAAGAATTCATGAATGAAGTAGTGGTCCTTTGTAAGCTTCAACATCGTAATCTTGTAAGACTTCTTGGCTGCTGTATTGATGGCGATGAAAGGATGTTGATGTATGAGTACATGCCAAACAAAAGTTTGGATGCATTTATCTTTGATCCATCAAAAAATAAACTTCTAGATTGGAAGACACGATACAACATTATAGAAGGAATAGCTCGAGGATTGTTGTATCTTCACAGAGATTCCAGACTACGAATTATACACAGAGATCTGAAAGCAAGTAATATCTTGTTAGATGAGGAGCTAAATCCGAAAATTTCTGACTTTGGTATGGCCAGAATCTTCGGAGGTAGAGAAGATCAGGCTAATACTACCAGAGTTGTTGGAACTTATGGCTATATGTCTCCTGAATACGCAATGCAAGGACTTTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGATACTAGAGATTGTTAGTGGGAGAAGAAACTCAAGCTTTTATGACAATGAGCATGCTCTAAGTCTTTTAGGATTTGTTTGGAACCAATGGAGGGAAGGCAATATTTTATCTTTAATAGAGCCAGAAATATATTGTCCTAGTCATCATAATTATATTTCAAGGTGCTTACATATAGGACTTTTGTCTGTACAAGAACTGGCTGTAGATAGGCCCACTATGGCTGCAGTGATTTCTATGCTTATCAGTGAGGCTACATTTCTTCCTCCTCCAAGTCAACCTGCATTCATCCTGAGGCAAAATATGTTGAATTCAAAGTCGCCTGAAGAAAATCAAAGTGTTTTTTCCATTAATACTGTCAGTATTACAGATATGGGTGGCAGATAG 2043 0.3798 MKLSINKRTGKSIKLTSWKSPSDPSIGNFSSSTVERLNIPELFIWNETRPCWRSGPWNGGVFTGIQTMKLAYFNSFQGGDDGEGNIVIFYTISNDQELMIYHLNSQGIIEETWWDDEKKEELVTWTSRKSECDVYGTCGEFSSCSSLSRPICSCLKGFEPRSIQEWNRNNWTGGCVRKTPLQCERVNNETTSTKEDGFLKLKMVKVPDFAEGIAVTPDICRRLCLENCSCVAYSHDTGIGCMYWTRNLLDIQQLESGGLDLYFRVAHTELERGRNKTVIIIIIVIIGTINIVICAYIMWRRTSNNSTKSTTKTKNKSFRLFNKGGASEVHTSDDIIGKLSQAKLQELLLFDFGKLEIATNKFALSNKLGEGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVLCKLQHRNLVRLLGCCIDGDERMLMYEYMPNKSLDAFIFDPSKNKLLDWKTRYNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMARIFGGREDQANTTRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNEHALSLLGFVWNQWREGNILSLIEPEIYCPSHHNYISRCLHIGLLSVQELAVDRPTMAAVISMLISEATFLPPPSQPAFILRQNMLNSKSPEENQSVFSINTVSITDMGGR* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1748 680 SMART serkin_6 362 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1748 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Mal3g1748 680 Pfam PAN-like domain 193 251 IPR003609 -
Mal3g1748 680 CDD PAN_AP_plant 179 266 - -
Mal3g1748 680 Gene3D Transferase(Phosphotransferase) domain 1 438 638 - -
Mal3g1748 680 Pfam S-locus glycoprotein domain 52 161 IPR000858 GO:0048544
Mal3g1748 680 ProSiteProfiles PAN/Apple domain profile. 183 266 IPR003609 -
Mal3g1748 680 Gene3D Phosphorylase Kinase; domain 1 337 437 - -
Mal3g1748 680 SMART ntp_6 193 265 IPR003609 -
Mal3g1748 680 CDD STKc_IRAK 368 633 - -
Mal3g1748 680 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 677 - -
Mal3g1748 680 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 677 - -
Mal3g1748 680 Pfam Protein tyrosine and serine/threonine kinase 364 631 IPR001245 GO:0004672|GO:0006468
Mal3g1748 680 SUPERFAMILY Protein kinase-like (PK-like) 347 670 IPR011009 -
Mal3g1748 680 ProSiteProfiles Protein kinase domain profile. 362 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1748 Mal-Chr3 73777177 73779809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1748 327 680 Receptor kinase-like Gene Family AT4G11530 55.278 4.94e-128 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal3g1748 PK_Tyr_Ser-Thr 4.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1748 - - mtr:MTR_7g056623 1014.99