Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1678 ATGATGGGTTTCAGTTCCTGCTCGAATCTGTTATTTGTTTTGTTCATTCTATTTTTCTATTTGTTACATGTTAGTATCGGTATAGAAACTATCACATCATCCCAATTCATCAAGGACCCTGAAACTCTAAACTCCAAAGATGGTTACTATGCCTTGGGATTCTTTAGCCCTGGAAATTCTACAAATCGTTACGTTGGAATTTGGTGGAAGTCAGAACCTATAATCATATGGGTGGCAAACAGAAACCAACCGCTGAATGATTCTAATGGGATTGTCACAATATCTGAAGATGGAAATCTTGTGGTATTGAATGGACAGAAACAAGTCATTTGGTCATCAAATGTCTCTAACATAGCATCCAATACCACTTCCCAGTTTTCAGACAATGGAAACCTTGTCCTTTTGGAGAGCACAACAGGAAACATGTTATGGCAGAGTATTCAGCAACCTACAGATACATTACTGCCTGGTATGAAACTTTCTATCAACAAAAGAACAGGTGAGAAAACAAAACTAAGATCATGGAAAAGCCCTTCGGATCCATCTGTTGGGAGTTTTTCTTGTAGTAGTGTTGAACGCGGAAATATACTTGAAGTGTTAATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCCTGGAATGGTAGGGTCTTCACAGGGATAGATACTATGACAACTGCATATTTTAACGGTTTTCAAGGTGGAGATGATGGAGAAGGGAATATTAATATATTTTTCACGATCCCAAATAATGAGGTCTTCATGATATATAACCTGGATTCACAAGGAAAATTAGAAGAATCACTGTGGAATGATGAGAAGAAAGAAGTGCAAGTTAAATTCACTAGCCCGAAATCGGAGTGTGATGTTTATGGTATTTGTGGGGCATTTGCAATTTGTAATTCATTAGGCACACCAATTTGCAGATGTTTGAAAGGATTTGTTCCAATGAACATACAGGAATGGAATAGAAACAATTGGTCTGGTGGGTGTGTTAGGAGAACAGCTTTGCAGTGTGAAAGGGTCATCAATAAAACCACAAGTACAAAGGAAGATGGGTTTTTGAGAATGCATGCGGTTAAAGTTCCAGATTTTGGCCAAGGTTTAGCTGTTACACCAGATATATGCAGAAGCTTATGCTTGGAGAATTGCTCTTGCACTGCATACTCTAACGATGCTGGGATTGGCTGTATGTCTTGGACTGGTAATTTACTTGACATACAACAACTCGAAAGTGCAGGACTTGATCTATATTTTCGCGTATCCGAGGCTGAGCTTGATAGTGGGGGAAACAAACCAATCATTATTACAATTATTATAGTGATACTAGGCACTCTCTTAATTGTCATTTGTGCATATATCATGTGGAGAAGGACTTCAAAAAACTCAGCTAAACTATGGCCTTGTATCAAATCAACAAGGAAAGGTGGAATATCAGAAGAAGAAAGTAATAGTGATGATGTAATTGGAGGATTGTCCCAAGTTAAACTACAGGAGCTATTACTATTTGATTTCGAAAAGCTTGCAACAGCCACAAACAACTTCCACTTGTCCAACAAACTTGGAGAGGGTGGTTTTGGTCCCGTATACAAGGGAAAACTGCAAGATAGTCGGGAAATAGCAGTTAAAAGACTTTCTACAGCATCTGGACAAGGGCTAGAAGAATTCATGAATGAAGTAGTGGTCCTTTGTAAGCTTCAACACCGTAATCTTGTAAGACTTCTTGGCTGCTGTATTGACGTTGATGAAAAGATGTTGATGTATGAGTACATGCCAAATAAAAGTTTGGATGCATTTATCTTTGATCCATCAAAAAATAAACTCCTAGATTGGAGGACAAGGTATAACATTATAGAAGGAATAGCTCGAGGATTGTTGTATCTTCATAGAGATTCGAGACTAAGAATTATACACAGAGATTTGAAGACAAGTAATATCTTGTTAGATGAGGAGCTGAATCCAAAAATTTCCGACTTTGGTATGGCTAGAATCTTTGGAGGGAGAGAAAATCAGGCCAATACTACCAGGGTTGTCGGAACTTACGGCTATATGTCACCCGAATACGCAATGCGAGGACTTTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGATACTAGAGATTGTTAGTGGGAGAAGAAACTCAAGCTTTTATGACAATGAGCATGCTCCAAGTCTTTTAGGATTTGTCTGGATACAATGGCAGGAAGGAAATGTTTTATCTTTAATAGATCCAGAAATATATGATCATAGTCATCACCAGAATATTTTGAGGTGCATTCATATAGGACTTTTATGTGTACAAGAATCAGCTGTAGATAGGCCTTCTATGGCTACAGTAATTTCTATGCTTATCAGTGAAATTATGGACATTCCACCTGCAAGGGAACCTGCATTCCTACTGAGGCAGCAGAATATGTTGAATTCAAAGTCACCTGAAGAAAATCAAATTGTTTTTTCCTCTAATACTGTCAGTATTACAGATATGTGTGGCAGATAG 2508 0.3812 MMGFSSCSNLLFVLFILFFYLLHVSIGIETITSSQFIKDPETLNSKDGYYALGFFSPGNSTNRYVGIWWKSEPIIIWVANRNQPLNDSNGIVTISEDGNLVVLNGQKQVIWSSNVSNIASNTTSQFSDNGNLVLLESTTGNMLWQSIQQPTDTLLPGMKLSINKRTGEKTKLRSWKSPSDPSVGSFSCSSVERGNILEVLIWNETRPYWRSGPWNGRVFTGIDTMTTAYFNGFQGGDDGEGNINIFFTIPNNEVFMIYNLDSQGKLEESLWNDEKKEVQVKFTSPKSECDVYGICGAFAICNSLGTPICRCLKGFVPMNIQEWNRNNWSGGCVRRTALQCERVINKTTSTKEDGFLRMHAVKVPDFGQGLAVTPDICRSLCLENCSCTAYSNDAGIGCMSWTGNLLDIQQLESAGLDLYFRVSEAELDSGGNKPIIITIIIVILGTLLIVICAYIMWRRTSKNSAKLWPCIKSTRKGGISEEESNSDDVIGGLSQVKLQELLLFDFEKLATATNNFHLSNKLGEGGFGPVYKGKLQDSREIAVKRLSTASGQGLEEFMNEVVVLCKLQHRNLVRLLGCCIDVDEKMLMYEYMPNKSLDAFIFDPSKNKLLDWRTRYNIIEGIARGLLYLHRDSRLRIIHRDLKTSNILLDEELNPKISDFGMARIFGGRENQANTTRVVGTYGYMSPEYAMRGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNEHAPSLLGFVWIQWQEGNVLSLIDPEIYDHSHHQNILRCIHIGLLCVQESAVDRPSMATVISMLISEIMDIPPAREPAFLLRQQNMLNSKSPEENQIVFSSNTVSITDMCGR* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1678 835 CDD PAN_AP_plant 336 423 - -
Mal3g1678 835 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Mal3g1678 835 SUPERFAMILY Protein kinase-like (PK-like) 499 787 IPR011009 -
Mal3g1678 835 Pfam PAN-like domain 350 408 IPR003609 -
Mal3g1678 835 SMART ntp_6 350 422 IPR003609 -
Mal3g1678 835 Gene3D Phosphorylase Kinase; domain 1 493 591 - -
Mal3g1678 835 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Mal3g1678 835 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Mal3g1678 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 66 181 IPR036426 -
Mal3g1678 835 ProSiteProfiles Protein kinase domain profile. 516 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1678 835 SMART serkin_6 516 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1678 835 CDD B_lectin 34 146 IPR001480 -
Mal3g1678 835 Gene3D Transferase(Phosphotransferase) domain 1 592 794 - -
Mal3g1678 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Mal3g1678 835 CDD STKc_IRAK 522 787 - -
Mal3g1678 835 PIRSF SRK 1 835 IPR024171 GO:0004674
Mal3g1678 835 Gene3D - 24 148 IPR036426 -
Mal3g1678 835 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 832 - -
Mal3g1678 835 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 23 832 - -
Mal3g1678 835 Pfam Protein tyrosine and serine/threonine kinase 517 786 IPR001245 GO:0004672|GO:0006468
Mal3g1678 835 SMART blect_4 34 150 IPR001480 -
Mal3g1678 835 Pfam D-mannose binding lectin 75 176 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1678 Mal-Chr3 71325230 71328353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1678 430 835 Receptor kinase-like Gene Family AT4G21410 51.699 4.32e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal3g1678 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1678 - - cam:101513672 1227.62