Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1622 ATGGAAACAATTAAAGCTAAACTTGAGATAAATGGGAAGAATCTTCAATGTCAACTTTCCAAGGTTATGGAAGCAGTGTCAAGAAATAACTCATCAGGGGAAGTTAATGTTCAAATGGTTTCTTCAAAACTTGAGATATTTAAAGGTTTCCCTCAAGACTTGGGAGAGGATAATATCATTCAAGTTGTATCATTCAAGAATACTATCAAATTACCCTATGTTGAAAAGATACCTCATTATACTGTTTGGTTATATTTGGTTAGGAATGAGAAAATGACCAAAGACCAATCATTTGCTGCAAGAAGAAACATATACTATGATGGAGGTGAAACAAAGATATGTAGTGATGATGATAATGATGATACCGATGAAGAGGTCCAAGAGAATACAGAAGTTAAACATGACTTTTCTCATGGTGAAGACCAAATTCTATGGATGGCATTTGAGGAACACGGTTTAACTGAGGAGGTGTCAAGTATTGTTCAGAGCTATATTGGGGGTACCAATTCAGAGATTCAGGAGAGGTATGAATATCTCAAAGAAAAGGAAATGCTTGCTAAAGATTCAAGAGGAAGTGGATCTAATTCTGACACATATTTGGACAAAAGTTTGAGTGAGGCTTTAAAAACCTTTGATCACTTTTTCTGTCGTCGTTGCTTGATCTTTGACTGTCCTTTGCACGGATGTTCTCAACCATTAATATCTTCGAGTCAAAAGCAACCAATTTGGCATGGACCAAAAGATGCTAAGGGGAAACCATGCGGTGACCATTGTTACCTTGTCCATAAGTTAAAGGATGTCAATAACTCATCAGAAGGTTCAACTTCAGGGTCTTTTCCACATAAAGAAATTAAAACCATAGAAAATGTAGATGGGATATTGGCACCCTCTAGTTCAAAGGAAATCACAGATAAAATAGAATTGATGCAATTATGCAACTCAATGGAAGGGCAAGATGATGAGATGCATAGTACCTCTCAATGGAAACCTTTGGAGAAAGACTTATGTTTGAAGGGAGTAGAAATGTTTGGGAAAAACAGCTGCCTCATACGTCGGAACTTACTTTCTGGCTTCAAAACTTGCATGGAAATAGCCAGATACATGCATGAAGAGATGCCCAATGGATCCATGGATGAAAATGGAAATTGTGATGCAGTGATCAATGACCATGAGATGCCATCAAGCTCTAGGAGAGGTAGGAAAAAAGGAAAAAGCAAGAAGAAGTTCAAATATTTATCAAAGTCTCTACGCATCCAATATACACATAAAAGAATTAGTGCTGGGGAAAAGGAAGTCAATAAGCATTATACACCTTGTAAGTGTCGAGGAATGTGTAGCAAGGAACAATGTCCTTGTCTTCTTAAAGGATCTTGCTGTGAAAAATTTTGTGGGTGTGACAAGCAATGCATATATCGATACAGAGGTTGTCTTTGTGTTAAAAGTCAATGTAGAAGTCGACATTGTCCATGCTTTGCAGCAAAACGGGAATGCGACCCAGATGTGTGTAAAAATTGTTGGGCAAGTTGTGGTGATGGTACATTAGAAGCGCCACTTCCTCAAGGAGATGGTCAATGTGAAAATATGAATCTCCTTTTAGGGAAAAATAAACAAAGGATTCTTTTAGCAAGGTCTGATGTTGCTGGATGGGGAGCCTTCTTAAAGAACCCTGCCAACAAAAATGATTATCTAGGAGAGTACACAGGTGAATTAATCTCTCATAGAGAAGCAGATAAGCGTGGTAAATTGTATGAGCATGGAGATTTCTCTTTCCTTTTTGACGTGGATGATAAGTATTGCATTGATGCTTATCGCATGGGAGACAAGTTAAAATTTGCAAACCACTCATCAAAACCCAATTGTTATGCAAAGGGTATGTTTGTTGGTGGAGACCATCGAGTAGCCATATTTGCCAAACAAAGAATTGAAGCTGGTGAGGAACTTTTCTATGATTACTGCTATACAGAAAATCAAAGAGCACCCTCATGGTTTCATAAAGCCAATAATAATAATAATAGTAATGGTTCCAAGAAAAAAGAATCTTCAAGTTCTCATGGCAAAGCCAAGAAACGTGTGTCTTGTTGA 2082 0.3751 METIKAKLEINGKNLQCQLSKVMEAVSRNNSSGEVNVQMVSSKLEIFKGFPQDLGEDNIIQVVSFKNTIKLPYVEKIPHYTVWLYLVRNEKMTKDQSFAARRNIYYDGGETKICSDDDNDDTDEEVQENTEVKHDFSHGEDQILWMAFEEHGLTEEVSSIVQSYIGGTNSEIQERYEYLKEKEMLAKDSRGSGSNSDTYLDKSLSEALKTFDHFFCRRCLIFDCPLHGCSQPLISSSQKQPIWHGPKDAKGKPCGDHCYLVHKLKDVNNSSEGSTSGSFPHKEIKTIENVDGILAPSSSKEITDKIELMQLCNSMEGQDDEMHSTSQWKPLEKDLCLKGVEMFGKNSCLIRRNLLSGFKTCMEIARYMHEEMPNGSMDENGNCDAVINDHEMPSSSRRGRKKGKSKKKFKYLSKSLRIQYTHKRISAGEKEVNKHYTPCKCRGMCSKEQCPCLLKGSCCEKFCGCDKQCIYRYRGCLCVKSQCRSRHCPCFAAKRECDPDVCKNCWASCGDGTLEAPLPQGDGQCENMNLLLGKNKQRILLARSDVAGWGAFLKNPANKNDYLGEYTGELISHREADKRGKLYEHGDFSFLFDVDDKYCIDAYRMGDKLKFANHSSKPNCYAKGMFVGGDHRVAIFAKQRIEAGEELFYDYCYTENQRAPSWFHKANNNNNSNGSKKKESSSSHGKAKKRVSC* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1622 693 Gene3D SET domain 436 654 IPR046341 -
Mal3g1622 693 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 309 690 IPR045318 GO:0006338|GO:0018024
Mal3g1622 693 ProSiteProfiles SET domain profile. 537 652 IPR001214 GO:0005515
Mal3g1622 693 MobiDBLite consensus disorder prediction 663 693 - -
Mal3g1622 693 SMART set_7 537 658 IPR001214 GO:0005515
Mal3g1622 693 Pfam CXC domain 475 507 IPR041355 -
Mal3g1622 693 SUPERFAMILY SET domain 409 658 IPR046341 -
Mal3g1622 693 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 3 282 - -
Mal3g1622 693 SMART CXC_2 471 508 IPR033467 -
Mal3g1622 693 Pfam SET domain 548 651 IPR001214 GO:0005515
Mal3g1622 693 MobiDBLite consensus disorder prediction 663 678 - -
Mal3g1622 693 ProSiteProfiles CXC domain profile. 415 522 IPR026489 -
Mal3g1622 693 CDD SET_EZH 537 653 - -
Mal3g1622 693 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 3 282 IPR045318 GO:0006338|GO:0018024
Mal3g1622 693 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 309 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1622 Mal-Chr3 69139870 69152151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1622 525 651 C2H2 Transcription Factor Family AT2G23740 29.167 5.35e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal3g1622 SET 3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1622 - K11430 mtr:MTR_7g055660 992.26