Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal3g1609 | ATGAACGACGACTTCGATATTCCTCAAGCCGAAGAAATGAACGAAGATTTCGATCTTCCCGAAGAGAAGGTTGGTGATGAGAGAGAAGTCGGCGATCGTGGTCTCAAGAAGAAGCTTCTCAAACTTGGTGAAGGTTGGGATACTCCTGAATCCGGTGATGAAGTTCAAGTTCACTACACTGGAACTTTGCTTGATGGAACTAAGTTTGATTCAAGTCGTGATAGAGATTCTCCTTTCACCTTCACGCTTGGACAAGGGCAAGTAATTCAAGGATGGGATGAAGGTATTAAAACCATGAAGAAAGGTGAAAGTGCACTCTTCACCATCCCTCCCGAGCTAGCTTATGGTGAATCTGGTTCACCTCCAACAATTCCTCCCAATGCGACACTCCAATTTGATGTTGAGCTGTTGTCTTGGACAAGTGTGAAGGACATATGTAAAGATGGCGGTATATTCAAGAGGATACTTAGTGAGGGGGAGAAATGGGAGAACCCCAAGGATCCTGATGAAGTATTGGTTAATTATGAGGTTCGTCTGGAGGATGGAAAGGTTGTAGCAAAGTCTGATGGAGTGGAGTTCACTGTCAGTGAAGGTCATTATTGCCCTGCATTCTCAAAGGCTGTTAAGGCCATGAAGAAGGGAGAGAAAGTGATTTTGTTAGTAAAGCCTCAATATGGATTTGGTGAGAAGGGGAAGCCAGCGCATGGTGATGAAGGTGCAGTTCCACCAAATGCATCACTGCAGATTACACTTGAGTTGGTTTCTTGGAAGACTGTTTCAGACGTGACTAGTGACAAGAAGGTCATAAAGAAGATCCTCAAGGAAGGGGAAGGATATGAGCGTCCAAATGAAGGGGCCATCGTAAAATTGAAACTAATTGGTAAACTACAAGATGGTACTGTCTTTTTCAAAAAGGGTCATGATGAAGAAGAGAAGCTGTTTGAATTCAAAACTGATGAGGAGCAAGTCATTGATGGACTTGATAAAGCTGTAATCACTATGAAGAAGGGTGAGGTAGCATTATTGATCATTGCTCCCGAGTATGCATTTGGTTTATCACAGTCCCAGCAGGATTTGGCCGTAATTCCTCCTAATTCAACTGTGTATTATGAAGTTGAGCTAGTGTCATATGAGAAGGAGAAGGAGTCTTGGGATATGAACACTCAGGAGAAAATTGAAGCTGCTGCTAAGAAGAAAGAAGAAGGAAATGTTTTGTTTAAAGCTGGTAAATATGAAAGAGCTTCCAAAAGATATGATAAGTCTGTGAAGTACATAGAGTATGATTCCTCCTTCAGCGAGGAGGAGAAAAAGCCGTCAAAGACCTTGAAGATTGCCTCTTATCTAAACAACGCTGCCTGCAAGTTGAAGTTGAAAGAGTACAAAGATGCAGAGAAATTGTGTACTAAGGTGTTGGACATTGAGAGCACAAATGTTAAAGCCCTCTATAGAAGGGCCCAAGCAAGTATGCAGTTAACTGACTTGGATTTAGCTGAAATTGACATCAAAAAAGCTCTTGAGGTTGACCCTGACAACAGGGAAGTAAAGCTGGAGTACAGGAATTTGAAGGAAATGGTAAAGGAGTACAATAGAAAGCAGGCAAAATTCTATGGAAATATGTTCAGCTTGAGAAAGACTTGA | 1638 | 0.4194 | MNDDFDIPQAEEMNEDFDLPEEKVGDEREVGDRGLKKKLLKLGEGWDTPESGDEVQVHYTGTLLDGTKFDSSRDRDSPFTFTLGQGQVIQGWDEGIKTMKKGESALFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKRILSEGEKWENPKDPDEVLVNYEVRLEDGKVVAKSDGVEFTVSEGHYCPAFSKAVKAMKKGEKVILLVKPQYGFGEKGKPAHGDEGAVPPNASLQITLELVSWKTVSDVTSDKKVIKKILKEGEGYERPNEGAIVKLKLIGKLQDGTVFFKKGHDEEEKLFEFKTDEEQVIDGLDKAVITMKKGEVALLIIAPEYAFGLSQSQQDLAVIPPNSTVYYEVELVSYEKEKESWDMNTQEKIEAAAKKKEEGNVLFKAGKYERASKRYDKSVKYIEYDSSFSEEEKKPSKTLKIASYLNNAACKLKLKEYKDAEKLCTKVLDIESTNVKALYRRAQASMQLTDLDLAEIDIKKALEVDPDNREVKLEYRNLKEMVKEYNRKQAKFYGNMFSLRKT* | 546 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal3g1609 | 545 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Mal3g1609 | 545 | SUPERFAMILY | FKBP-like | 144 | 260 | - | - | |
| Mal3g1609 | 545 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Mal3g1609 | 545 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 285 | 378 | IPR001179 | GO:0003755 | |
| Mal3g1609 | 545 | SUPERFAMILY | FKBP-like | 19 | 149 | - | - | |
| Mal3g1609 | 545 | Gene3D | Tetratricopeptide repeat domain | 381 | 538 | IPR011990 | GO:0005515 | |
| Mal3g1609 | 545 | Pfam | Tetratricopeptide repeat | 479 | 511 | IPR019734 | GO:0005515 | |
| Mal3g1609 | 545 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 263 | - | - | |
| Mal3g1609 | 545 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 266 | 377 | - | - | |
| Mal3g1609 | 545 | Gene3D | - | 6 | 141 | IPR046357 | GO:0003755 | |
| Mal3g1609 | 545 | Gene3D | - | 258 | 379 | IPR046357 | GO:0003755 | |
| Mal3g1609 | 545 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 168 | 257 | IPR001179 | GO:0003755 | |
| Mal3g1609 | 545 | ProSiteProfiles | TPR repeat profile. | 478 | 511 | IPR019734 | GO:0005515 | |
| Mal3g1609 | 545 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 378 | 542 | - | - | |
| Mal3g1609 | 545 | Gene3D | - | 142 | 257 | IPR046357 | GO:0003755 | |
| Mal3g1609 | 545 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 263 | - | - | |
| Mal3g1609 | 545 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 378 | 542 | - | - | |
| Mal3g1609 | 545 | SMART | tpr_5 | 478 | 511 | IPR019734 | GO:0005515 | |
| Mal3g1609 | 545 | SMART | tpr_5 | 444 | 477 | IPR019734 | GO:0005515 | |
| Mal3g1609 | 545 | SMART | tpr_5 | 395 | 428 | IPR019734 | GO:0005515 | |
| Mal3g1609 | 545 | SUPERFAMILY | FKBP-like | 259 | 397 | - | - | |
| Mal3g1609 | 545 | SUPERFAMILY | TPR-like | 383 | 540 | IPR011990 | GO:0005515 | |
| Mal3g1609 | 545 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 279 | 375 | IPR001179 | GO:0003755 | |
| Mal3g1609 | 545 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 163 | 253 | IPR001179 | GO:0003755 | |
| Mal3g1609 | 545 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 48 | 137 | IPR001179 | GO:0003755 | |
| Mal3g1609 | 545 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 52 | 140 | IPR001179 | GO:0003755 | |
| Mal3g1609 | 545 | Coils | Coil | 511 | 531 | - | - | |
| Mal3g1609 | 545 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 266 | 377 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal3g1609 | Mal-Chr3 | 68566752 | 68573267 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal3g1609 | 23 | 541 | Calmodulin-binding Proteins | AT3G25230 | 77.457 | 0.0 | 834 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal3g1609 | K09571 | - | gmx:100812632 | 915.99 |