Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1607 ATGGGTATTTCTAGGGATTCTATGCACAAGAGACGTGCCACTGGTGGCAAGCAGAAGACATGGAGAAAGAAGCGAAAGTACGAGCTTGGTCGCCAGCCAGCCAACACTAAGTTGTCGAGCAACAAGACAGTCAGGAGGATCCGTGTTAGAGGTGGCAATGTGAAATGGAGAGCTCTTAGATTGGACACCGGAAATTTCTCATGGGGTAGTGAGGCCGTAACTCGCAAGACTCGTCTTCTGGATGTGGTCTACAATGCCTCAAATAATGAGCTTGTTCGTACTCAGACTTTGGTTAAGAGTGCTATTGTCCAAGTTGATGCTGCACCATTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAGTTGGTAGAAAAAAGAAAACAGCAGCAAAGAAGGATTCTGCAGAGGAGGCTGAAGTTGTTGCTGAAGAAGTTAAGAAAAGTAAACACGTGCAGAGAAAGCTTGAGCAGCGTCAGAAAGATAGGCAACTTGATCCCCATATCGAAGAGCAGTTCGGTGGTGGCCGTTTGCTTGCCTGCATTTCATCTCGCCCTGGTCAATGTGGCAGGGCTGATGGGTACATTCTTGAAGGTAAGGAGCTGGAGTTTTACATGAAGAAATTACAAAAAAAGAAGGGAAAGAGTGCTGCTTAA 654 0.4633 MGISRDSMHKRRATGGKQKTWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEVGRKKKTAAKKDSAEEAEVVAEEVKKSKHVQRKLEQRQKDRQLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKSAA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1607 217 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Mal3g1607 217 Gene3D Ribosomal protein S8e, subdomain 108 175 IPR042563 -
Mal3g1607 217 Pfam Ribosomal protein S8e 5 196 IPR022309 -
Mal3g1607 217 Gene3D - 26 212 - -
Mal3g1607 217 CDD Ribosomal_S8e_like 5 196 - -
Mal3g1607 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mal3g1607 217 TIGRFAM eS8: ribosomal protein eS8 1 198 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mal3g1607 217 MobiDBLite consensus disorder prediction 1 34 - -
Mal3g1607 217 PANTHER 40S RIBOSOMAL PROTEIN S8 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1607 Mal-Chr3 68542956 68545323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1607 1 205 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 85.366 4.59e-128 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1607 K02995 - qsu:111988287 361.303