Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1590 ATGAAGTTCAATGTTGCGAATCCCACCACTGGATGCCAGAAGAAGCTTGAGATCGATGACGATCAGAAACTACGAGCATTTTGGGACAAGAGGATTTCCCAAGAGGTCCATGGGGATGCACTTGGCGATGAGTTTAAAGGCTATGTCTTTAAAATTACCGGAGGTTGTGACAAACAAGGATTCCCAATGAAGCAGGGTGTGCTGACTCCTGGCCGTGTTCGTCTTTTGCTTCACAGGGGAACTCCTTGCTTTCGTGGATATGGAAGGCGTAATGGAGAGCGCAGAAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTCTGAACTTGGTAATTGTGAAGAAGGGTGAGAATGATTTACCTGGCCTGACTGACGTTGAGAAGCCAAGGATGAGAGGTCCAAAGAGAGCATCCAAGATCCGTAAGCTGTTCAACCTGTCTAAGGATGATGATGTGAGGAAGTATGTCAACACCTACCGTAGGACATTTACAACAAAAGCAGGGAAAAAGGTCAGCAAAGCTCCCAAGATACAGAGACTGGTTACTCCTCTTACACTCCAAAGAAAGCGAGCAAGGATTGCCGATAAGAAGAAGAGAATTGCCAAGGCAAAATCAGAGGCAGCTGAGTACCAGAAGCTTCTTGCTTCCAGGTTGAAGGAGCAGAGAGAGCGTCGCAGTGAGAGTTTAGCAAAAAAGAGATCGAGGATTTCTAGTGCTTCTAAGGCATAA 738 0.4688 MKFNVANPTTGCQKKLEIDDDQKLRAFWDKRISQEVHGDALGDEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRISSASKA* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1590 245 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Mal3g1590 245 PANTHER 40S RIBOSOMAL PROTEIN S6 1 244 - -
Mal3g1590 245 Coils Coil 189 216 - -
Mal3g1590 245 MobiDBLite consensus disorder prediction 220 245 - -
Mal3g1590 245 PIRSF RPS6e 1 245 IPR014401 GO:0003735|GO:0005840|GO:0006412
Mal3g1590 245 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal3g1590 245 Gene3D - 133 234 - -
Mal3g1590 245 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal3g1590 245 PANTHER 40S RIBOSOMAL PROTEIN S6 1 244 IPR001377 GO:0003735|GO:0005840|GO:0006412
Mal3g1590 245 MobiDBLite consensus disorder prediction 220 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1590 Mal-Chr3 68040838 68043243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1590 1 242 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 73.554 8.05e-120 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1590 K02991 - gmx:547746 411.379