Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1580 ATGATGAAACAAAGCAGTTCTAATCTTTCCAAGATGGAAAGAAAAGTTGGTGGCTTATACTTGATGGACTTCACACCTGATGAACATGAAGCAGCTGACGGTCTTGTTTTATTGCAAACACTATTCCAAAAGAAGAAGAAGAGTAGAAAATTCAACAATGTTCATTCAACACTACAAATCAATCCTAATGTTGTTAGGGAGAATGGATACAACCCTCCCAATATACCGACGATTCCTGGCGTACCAAGCAATAATATTCTTGGATGTTGCAAGCCTTTTGAAAAAAAACTATCGCACAGTGATTTGAAGGTGGATCAAAATAGATTATTTTTGAACAAGAATCACGTGAAAGAATATTTCTTGCCCTTGTTGAAAGATGGTGAAGATGTTGAAGAAGGAATAGATGTTGTTGTATATGACATGCAAGGCCAAATATTCCACATGAAGTTCAATTTCTGGAGTAAAAAATTTTATGTTCTCAATGGATCAGGATGGAAGACTTTCTTTGAATCACATCGTTTGCTAGCAAATCAAGATCATGTTACAGTGTGGATGTTTCGTCATTCAGAAACCGATAATTTGTGTTTTGCTCTTAGCGTTAGAAGAGTGCAAGTTTAA 618 0.3576 MMKQSSSNLSKMERKVGGLYLMDFTPDEHEAADGLVLLQTLFQKKKKSRKFNNVHSTLQINPNVVRENGYNPPNIPTIPGVPSNNILGCCKPFEKKLSHSDLKVDQNRLFLNKNHVKEYFLPLLKDGEDVEEGIDVVVYDMQGQIFHMKFNFWSKKFYVLNGSGWKTFFESHRLLANQDHVTVWMFRHSETDNLCFALSVRRVQV* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1580 205 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 48 204 IPR005508 GO:0003677
Mal3g1580 205 SUPERFAMILY DNA-binding pseudobarrel domain 93 197 IPR015300 -
Mal3g1580 205 CDD B3_DNA 93 202 IPR003340 GO:0003677
Mal3g1580 205 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 48 204 - -
Mal3g1580 205 Gene3D - 93 205 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1580 Mal-Chr3 67601710 67602327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1580 91 198 B3 DNA Binding Superfamily AT4G03170 45.370 2.28e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1580 - - mtr:MTR_3g013810 199.904