Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1578 ATGATGAAACAAAGCAGTTCTATTCTTTCGAAGATGAAAAGAAAAATTGGTGACTTCACACCTGATGAATACGAAGCAGCTCACGGTCTTGTTCTATTGCAAACACTATTCAACAAGAAGAAGAAGAGTAGAAAATTCAAAATAACTCTTGGTGGCCAAACGATTTGTGAAAGAAGCTATAACAACAATGTTCATTCAACATTACAAATCAATCCTAATGCTGTTTGGGAAAATCGATACAGCCCTCCCGATATACCGACGATTCATGGCGTACCAAACAATAATATTCTTGGATGTTGCAAGCCTTTCGAGAAAAAACTATCGCATAGTGATTTGAAGGTAGATCAAAATAGAATATTTTTGAACAAGAATCACGTGAAAGAATATTTCTTGCCCTTGTTGAGAGATGGTGAAGATGTTGAAGAAGGAATAGATGTCGTTGTATATGACATGCAAGGCCAAATGTTCCACATGAAGTTCAATTTCTGGAGTAAAAAATATTATGTTCTCAATGGATCAGGGTGGAAGACTTTCTTTGAATCTCATTGTTTGCTAGCAAATCAAGATCATGTTACGGTGTGGATGTTTCGTCATTCAGAAACCGATAATTTGTGTTTTGCTCTTAGCGTTAGAAGAGTGCAAGTTTAA 648 0.3596 MMKQSSSILSKMKRKIGDFTPDEYEAAHGLVLLQTLFNKKKKSRKFKITLGGQTICERSYNNNVHSTLQINPNAVWENRYSPPDIPTIHGVPNNNILGCCKPFEKKLSHSDLKVDQNRIFLNKNHVKEYFLPLLRDGEDVEEGIDVVVYDMQGQMFHMKFNFWSKKYYVLNGSGWKTFFESHCLLANQDHVTVWMFRHSETDNLCFALSVRRVQV* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1578 215 CDD B3_DNA 103 212 IPR003340 GO:0003677
Mal3g1578 215 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 68 214 - -
Mal3g1578 215 Gene3D - 103 215 IPR015300 -
Mal3g1578 215 SUPERFAMILY DNA-binding pseudobarrel domain 103 207 IPR015300 -
Mal3g1578 215 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 68 214 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1578 Mal-Chr3 67581992 67582639 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1578 24 208 B3 DNA Binding Superfamily AT4G03170 34.896 8.06e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1578 - - mtr:MTR_3g013810 199.904