Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1573 ATGAAAGGACAAGTCTCTAGAGCTCTTTCTTTTTCTCCAAGTTTGGTATGCAAGGACATTAGTGATGGGCAAGAAGCTATCAACATAATTGCAACCAATGAATTTGATGATCCTCCTGTTGCACCTATAGGTTTTACATATATTATATCACATAAAGTAGCAGAAGACGTAAAGGTTCCATCTAGGGATTCCGGATGCCATTGCAAAGGAAGTTGTAAAAATACTAAAATGTGTTCTTGTGCTAAGTATCTTAAGGGTTCTGAGTTTCCATACAGTAAAAGTGGCAGATTGATTGAGCCTCGAGCCATCATAGTTGAATGTGGCCCACGATGTGGATGTGGACCTAATTGTGGAAATAAGATTTCCCAAAAGGGTTTGAATTATCGACTTGAGGTTTATCGTACAACCAAAAAAGGTTGGGCTGTAAGAACATGGGACTTCATCCCTGCAGGTGCACCAATACTCGAATATATTGGTGTACTAAGAAGGGATGATAATTTAAACAATTCCATTGAAAATGATTATATATTTGATATTGATTGTTTACACACAATCAACGGAATAGATGGAAGAGAGAAACGGTTGGGTAATGTACCATTGCCTATAAGCAACTTATCAGAAAAAAGGAACAAGTTAATGGAAAAAGATCCTGAATATTGTATAGATGCTGGTTCTTTTGGTAATGTTTCAAGATTTATCAACCATGGATGTGACCCAAACCTCTTTGTACAATGTGTTCTCAGCAACCACCTAGATCCTAGACTAGCTCGTGTGGTGCTATTTGCAGCACAAGACATACCTCCTTATCATGAACTCACATATGACTATGGTTACACACTCAATAGTGTGATTGGTTCTGATAAAAAAATCAAACAACTACAATGTCAATGTGGTGCAAAGGAATGTCGTAAGCGCTTGTACTAG 924 0.3766 MKGQVSRALSFSPSLVCKDISDGQEAINIIATNEFDDPPVAPIGFTYIISHKVAEDVKVPSRDSGCHCKGSCKNTKMCSCAKYLKGSEFPYSKSGRLIEPRAIIVECGPRCGCGPNCGNKISQKGLNYRLEVYRTTKKGWAVRTWDFIPAGAPILEYIGVLRRDDNLNNSIENDYIFDIDCLHTINGIDGREKRLGNVPLPISNLSEKRNKLMEKDPEYCIDAGSFGNVSRFINHGCDPNLFVQCVLSNHLDPRLARVVLFAAQDIPPYHELTYDYGYTLNSVIGSDKKIKQLQCQCGAKECRKRLY* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1573 307 ProSiteProfiles Post-SET domain profile. 291 307 IPR003616 -
Mal3g1573 307 ProSiteProfiles Pre-SET domain profile. 64 125 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal3g1573 307 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 2 306 - -
Mal3g1573 307 SMART PostSET_3 291 307 IPR003616 -
Mal3g1573 307 Pfam SET domain 139 277 IPR001214 GO:0005515
Mal3g1573 307 SUPERFAMILY SET domain 10 285 IPR046341 -
Mal3g1573 307 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 2 306 - -
Mal3g1573 307 Pfam Pre-SET motif 20 120 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal3g1573 307 SMART set_7 128 283 IPR001214 GO:0005515
Mal3g1573 307 Coils Coil 307 307 - -
Mal3g1573 307 Gene3D SET domain 10 307 IPR046341 -
Mal3g1573 307 SMART preset_2 17 112 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal3g1573 307 ProSiteProfiles SET domain profile. 128 277 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1573 Mal-Chr3 67398348 67401539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1573 1 307 EF-hand Containing Proteins AT5G13960 55.484 1.05e-119 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal3g1573 SET 3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1573 - K11420 mtr:MTR_7g052480 503.827