LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal3g1557	ATGTCCAAAATGATTTACTTGTGCTTGGTTTTGCTTCAAATTTCCTTGAGCTTTGTTCCAACTCAATCAGCACCAAGAGAGTCTCTAATAACCAAACTTCCTGGCTTCAGTGGTCCTTTCAATTTTATAAAACCAAAGACTAAGGGAACCTTACCTAAATTGCAACTGAATCCATACAGCTGGTCAAAGACTCCCCTTGCTGGAAGTGGGTTTTCTTACTCAAAGAATGTATCTGATTACAAAACTGGTGATACAAAGACTACTTTTGATACTCATACTTTTCTCCTCAAGTGGTTTGAATTGTACCCTGAGTTCCTTGCCAATCCATTATTTATTGCTGGAGAGTCTTATGCTGGAATTTATGTGCCTACTCTTGCTGATAAAATCGTAGAAGTTACTGATGATAAATTTGATGGTAATGCTCTTGTTCCATTTGCACATGGAATGGGTCTTATCTCCAACGAAATATTCGAGAATGCAACAAAAGAATGTAGGGGAAAATTCTATGAATATGACAGCAAAGGTTGCTCACAAGTGTTGTCAAAAGTTGGAATGGTACTATTCAAATTAAACATATATGACATTTTGGAACCATGTTATCATGATGGGGAGAATAAAACAACAAATTCTATGTTGCCATCAAGCTTTAGGCAACTGGGCAAGACTGATAGACCTCTGCCTGTGAGGAAAAGAATGTTTGGACGTGCTTGGCCCTACAGAGTTTCTGTGAAAGATGGAATTGTACCAAGTTGGCCGCAACTTATTACAAGCAATAATATTTATGCTCCTTGCATTGACGATGAGGTTTCTGTGATATGGTTAAACAATCGTAAGGTCCGAAGAGCTATTCACACTTTTGAGGAAAGTGTGGTCAAGGAGTGGGTCTTATGTACAGGGGGTGAAGTTACATACCATCATGATACCGGGAGCATGATTCCATACCACAAGAAACTAACTTCCAAAGGATATCGAGCTTTGGTATATAGTGGTGATCATGATATGTGTGTCCCATTTACTGGAACTGAAGCATGGACAAGATCAATTGGATGTAAAATTGTTGATGAGTGGAGGCCCTGGTTAATCAACAATGAAGTTGCTGGGGATCTGGACATACTGTTCCAGAATATAAACCACAGGAAGCATTGTATTTTTACCAACATTTTATAA	1167	0.3856	MSKMIYLCLVLLQISLSFVPTQSAPRESLITKLPGFSGPFNFIKPKTKGTLPKLQLNPYSWSKTPLAGSGFSYSKNVSDYKTGDTKTTFDTHTFLLKWFELYPEFLANPLFIAGESYAGIYVPTLADKIVEVTDDKFDGNALVPFAHGMGLISNEIFENATKECRGKFYEYDSKGCSQVLSKVGMVLFKLNIYDILEPCYHDGENKTTNSMLPSSFRQLGKTDRPLPVRKRMFGRAWPYRVSVKDGIVPSWPQLITSNNIYAPCIDDEVSVIWLNNRKVRRAIHTFEESVVKEWVLCTGGEVTYHHDTGSMIPYHKKLTSKGYRALVYSGDHDMCVPFTGTEAWTRSIGCKIVDEWRPWLINNEVAGDLDILFQNINHRKHCIFTNIL*	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal3g1557	388	Pfam	Serine carboxypeptidase	132	368	IPR001563	GO:0004185\|GO:0006508
	Mal3g1557	388	Gene3D	-	260	376	-	-
	Mal3g1557	388	ProSitePatterns	Serine carboxypeptidases, serine active site.	112	119	IPR018202	GO:0004185
	Mal3g1557	388	Gene3D	alpha/beta hydrolase	21	204	IPR029058	-
	Mal3g1557	388	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	30	370	IPR001563	GO:0004185\|GO:0006508
	Mal3g1557	388	PRINTS	Carboxypeptidase C serine protease (S10) family signature	98	123	IPR001563	GO:0004185\|GO:0006508
	Mal3g1557	388	PRINTS	Carboxypeptidase C serine protease (S10) family signature	63	73	IPR001563	GO:0004185\|GO:0006508
	Mal3g1557	388	SUPERFAMILY	alpha/beta-Hydrolases	34	367	IPR029058	-
	Mal3g1557	388	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 20	30	370	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal3g1557	Mal-Chr3	66903329	66930716	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal3g1557	269	367	Calmodulin-binding Proteins	AT2G22960	47.475	8.13e-27	103