Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1556 ATGGCAAACTTCTACTTGGTGTTGCTTCACATTTTTCTAACCTTTGTGCTTACACATTCAGCACCTAAAGGTTCTCTTATAACCCACCTTCCAGGCTTCAATGGATCTCTACATTCCAAGCACTATGCCGGGTACGTGACAGTGGATAAAAATCATGAAAAAAACTTGTATTATTACTTTGTGGAATCAGAAGGTAATTCATCGAAGGACCCTTTGGTTCTATGGCTTAATGGTGGACCAGGATGTTCTAGTTTTGATGGTTTCGTATATGAGCATGGTCCTTTTAATTTTGAAAAACCTAAGACCAAGGGTTCCTTGCCTAAGTTGGAACTCAATCCATATAGCTGGTCAAAGGTTTCCAACATTATATATTTAGACTCTCCTGTTGGAGTTGGGTTTTCATACTCAAAAAATTTATCTGATTACAAAACTGGAGATGTAAAGACCGCATCTGATACACATACTTTTCTCGTCAAATGGTTTGAATTATACCCTGAGTTCCTTGCCAACCCATTATTCATTGCTGGAGAATCTTATGCTGGAGTTTATGTGCCTACTCTTGCTGATTTAATAGTGAAAGGAGTTGAAGCTGGTACCAAGCCCAAATTGAATTTCAAGGGTTATATGGTTGGAAATCCTGTTACTGATGAGGTATTTGATGGAAATGCTCTTGTTTCATTTGCACATGGGATGGGTCTTATCCCCGAGGAACTTTTTGAGGAGTCAACAAAAGCATGCAATGGGACTTTCTATGTAGCATACACCGATAAGTGCTATAAGTTGTTGCAAAAAATTGAAAAGGCAATTGATGGATTAAACGTATATGACATTCTGGAACCATGTTATCATGGTGAAGAGAATAAAACATCAAATTCTAAGTTGCCATTAAGCTTTAGGCAATTGGGTAAGACTGATAAACCTCTTGCTGTGAGGAAAAGAATGTTTGGTCGTGCTTGGCCCTATAAAGCTATTGTGAAAGATGGATATGTGCCATCTTGGCCAGAACTTACAAGCAATAGTGATAGTGCTCCTCCTTGCATTGACGACGAGGTTGCTATGGTATGGCTGAACAATCGTAAGGTCAGGAGAGCTATTCACACTGTGAAGAAAAATGTGGTTAGTGAGTGGACCTTATGTACAGACCGAATTAAATACAAACATAATACTGGGAGTATGATCAAATACCACAAGAAACTTACTTCCAAAGGATATAGAGCATTAATATACAGTGGTGATCATGACATGTGTGTCCCATATACTGGAACAGAAGCATGGACAAGAGCAATTGGATATAAGATTGTTGATGAATGGAGGCCTTGGTTAACCAATGATCAAGTTGCAGGGTATACACAAGGATATGCCAACAATCTCACATTTGTGACCATAAAGGGATCTGGGCACACTGTTCCTGAATATAAGCCACAGGAGTCATTGCATTTTTACAAACAATTTCTAAATGGATTGCCTATCTAA 1473 0.387 MANFYLVLLHIFLTFVLTHSAPKGSLITHLPGFNGSLHSKHYAGYVTVDKNHEKNLYYYFVESEGNSSKDPLVLWLNGGPGCSSFDGFVYEHGPFNFEKPKTKGSLPKLELNPYSWSKVSNIIYLDSPVGVGFSYSKNLSDYKTGDVKTASDTHTFLVKWFELYPEFLANPLFIAGESYAGVYVPTLADLIVKGVEAGTKPKLNFKGYMVGNPVTDEVFDGNALVSFAHGMGLIPEELFEESTKACNGTFYVAYTDKCYKLLQKIEKAIDGLNVYDILEPCYHGEENKTSNSKLPLSFRQLGKTDKPLAVRKRMFGRAWPYKAIVKDGYVPSWPELTSNSDSAPPCIDDEVAMVWLNNRKVRRAIHTVKKNVVSEWTLCTDRIKYKHNTGSMIKYHKKLTSKGYRALIYSGDHDMCVPYTGTEAWTRAIGYKIVDEWRPWLTNDQVAGYTQGYANNLTFVTIKGSGHTVPEYKPQESLHFYKQFLNGLPI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1556 490 Pfam Serine carboxypeptidase 31 487 IPR001563 GO:0004185|GO:0006508
Mal3g1556 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Mal3g1556 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Mal3g1556 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Mal3g1556 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Mal3g1556 490 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Mal3g1556 490 Gene3D - 343 489 - -
Mal3g1556 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 13 487 IPR001563 GO:0004185|GO:0006508
Mal3g1556 490 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 13 487 - -
Mal3g1556 490 SUPERFAMILY alpha/beta-Hydrolases 27 489 IPR029058 -
Mal3g1556 490 Gene3D alpha/beta hydrolase 20 319 IPR029058 -
Mal3g1556 490 ProSitePatterns Serine carboxypeptidases, histidine active site. 457 474 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1556 Mal-Chr3 66870240 66874999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1556 351 490 Calmodulin-binding Proteins AT2G22960 47.143 3.72e-43 149