Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1541 ATGAAGACTTCATCCATGTTATTCATATTTTCAACCTTACAGTCCATAAAGCTTCGTGCAATATGTTTTGGTGCAATCCTAATGACTTCTTCTACCTATGTTAATTGTTCTTCATCTTCTTCAACCATAAGAAGTAGAGAAGCAAGTTCTTTGTTGAAATGGAAAAGCAACCTTGAAATGGAAAGCCAAGCTTTGCTATCTTCATGGAGTGGCAACAATTCATGCAACTGGCTAGGAATTACATGTGATGAAGATTACATATTTGTCACCAATGTAAATCTCACAAACATAGGATTAAAAGGGAAAATTCCGAAGGAGTTAGGCAACTTGACTTCATTGTACAAACTCTTGATAAGCAACAACTATCTTTCAGGAAACATTCCTGTAGAAATATCATCCTTAAATGAACTTGACACCTTAGACCTTGCAGCAAATAATCTAAGTGGCTTCATCACAAAACAAATTGCAATTTTGCCTAGGTTATGGAACTTAAATCTGAGCCATAACAAATTCATAGGAAATATTCCTGTTGAATTTGGCCATTTTAAAGTCCTTCAAAGTCTTGATCTTAGTGGGAATTTTCTCAACGGAACAATACCGTCAACGCTTGCTCAACTGAAATACTTAGAATCATTGAATATATCACATAATAACCTTTTTGGACTTATTCCCTCGAACTTCGATCAGATGCTCAGCTTGTTATCAGTTGACATATCGTTTAACCAATTCGAGGGTCCAATTCCAAACATTCCAGCTTTCAATAAAGCTACCATTGAAGTTTTGAGAAATAATAAAAGACTATGTGGTAATGTTTCTGGCTTGGAGCCTTGCTCAAAATCAAGTGGTACTAGATCTCATAATCATAAGATTAATAAAGTCTTATTGATTGTTTTACCACTTGCAATTGGAACTCTAATACTCGTATTAGTTTGTTTCAAATTCTCGCGTCTCTGCAAAAAGCCAACCACGAGAGAATACCTGGCTCGAAGGAACACTATTGATACTCAAAATCTATTTACCATATGGAGTTTTGATGGAAAAATGGTGTATGAGAATATTATTGAAGCCACAGAAGATTTTGATGACAAACATCTTATCGGAGTTGGAGGGCAGGGAAGTGTTTACAAAGCAGTGTTAGACACCGGTCAAGTAGTGGCTGTGAAAAAACTCCATTCAGTAATAGATGAAGATTCAAACCTAAAATCTTTCACAAGTGAGATCCAAGCTCTGATAGAAATTCGACATCGTAACATTGTGAAACTGTATGGATTTTGTTTGCATTCAAGATTCTCATTCTTAGTTTATGATTTCATGGAAAAAGGAAGCGTAGATAACATTTTGAAAGATGATGATCAAGCAATTGCATTTGATTGGAATAAGAGGGTGAATGTCATTAAAGATATAGCTAATGCTTTATGTTATATGCATCATCATTGCTCACCTCCAATCGTCCATCGAGATATATCAAGCAAGAATATACTTTTAAATTTGGAATATGTGGCTCATGTCTCGGACTTTGGAATAGCTAAGCTTCTTAATCCTGATTCAACCAACTGGACCTCATTTGCAGGAACCATTGGATATGCTGCTCCAGAATATGCATACACAATGAAAGTGAATGAGAAATGTGATGTTTATAGTTTTGGTGTGTTAGCATTGGAAATACTCTTTGGGAAACATCCAGGAGGTTTTATATACTATAATACCGCACCATCGCCTTTGTGGAAAATCGCGGGCTACAAACTTGATGATATGTCGTTGATGGATAAGTTGGATAAACGTCTCCCTCATCCTTCGAATCATTTTATTAATGAGTTAGTATCAATTTCAAGGATAGCAATTGCCTGCTTGACTGAAAGTTTACGATCTCGCCCTACCATGGAGCAAGTCACCAAAGAACTTGCAGTTTCAAATTTGTCTGCAATGTATTAG 1932 0.3597 MKTSSMLFIFSTLQSIKLRAICFGAILMTSSTYVNCSSSSSTIRSREASSLLKWKSNLEMESQALLSSWSGNNSCNWLGITCDEDYIFVTNVNLTNIGLKGKIPKELGNLTSLYKLLISNNYLSGNIPVEISSLNELDTLDLAANNLSGFITKQIAILPRLWNLNLSHNKFIGNIPVEFGHFKVLQSLDLSGNFLNGTIPSTLAQLKYLESLNISHNNLFGLIPSNFDQMLSLLSVDISFNQFEGPIPNIPAFNKATIEVLRNNKRLCGNVSGLEPCSKSSGTRSHNHKINKVLLIVLPLAIGTLILVLVCFKFSRLCKKPTTREYLARRNTIDTQNLFTIWSFDGKMVYENIIEATEDFDDKHLIGVGGQGSVYKAVLDTGQVVAVKKLHSVIDEDSNLKSFTSEIQALIEIRHRNIVKLYGFCLHSRFSFLVYDFMEKGSVDNILKDDDQAIAFDWNKRVNVIKDIANALCYMHHHCSPPIVHRDISSKNILLNLEYVAHVSDFGIAKLLNPDSTNWTSFAGTIGYAAPEYAYTMKVNEKCDVYSFGVLALEILFGKHPGGFIYYNTAPSPLWKIAGYKLDDMSLMDKLDKRLPHPSNHFINELVSISRIAIACLTESLRSRPTMEQVTKELAVSNLSAMY* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1541 643 SUPERFAMILY Protein kinase-like (PK-like) 333 634 IPR011009 -
Mal3g1541 643 Gene3D Phosphorylase Kinase; domain 1 323 437 - -
Mal3g1541 643 Pfam Leucine rich repeat N-terminal domain 46 83 IPR013210 -
Mal3g1541 643 Pfam Leucine rich repeat 185 243 IPR001611 GO:0005515
Mal3g1541 643 Pfam Leucine rich repeat 112 171 IPR001611 GO:0005515
Mal3g1541 643 Gene3D Transferase(Phosphotransferase) domain 1 438 641 - -
Mal3g1541 643 ProSiteProfiles Protein kinase domain profile. 360 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1541 643 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 99 640 - -
Mal3g1541 643 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 99 640 - -
Mal3g1541 643 Gene3D Ribonuclease Inhibitor 156 278 IPR032675 -
Mal3g1541 643 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 26 101 - -
Mal3g1541 643 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 26 101 - -
Mal3g1541 643 Pfam Protein kinase domain 361 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1541 643 ProSitePatterns Tyrosine protein kinases specific active-site signature. 483 495 IPR008266 GO:0004672|GO:0006468
Mal3g1541 643 SUPERFAMILY L domain-like 48 251 - -
Mal3g1541 643 Gene3D Ribonuclease Inhibitor 46 155 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1541 Mal-Chr3 66559580 66562579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1541 89 531 Receptor kinase-like Gene Family AT4G08850 45.778 2.45e-122 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal3g1541 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1541 - - mtr:MTR_7g050990 826.239